RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PPP1R27Q86WC6 154 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 MBD3L1Q8WWY6 194 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 LINC00052Q96N35 136 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 TBX15Q96SF7 602 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 SIGLEC9Q9Y336 463 aa10.95□□□□□ -0.66
HDAC6-215ENST00000465457 A0A0U1RQK1 487 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 CENPVL3A0A0U1RRI6 287 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 SMCO3A2RU48 225 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 CORTO00230 105 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 RNASE2P10153 161 aaKnown RBP10.94□□□□□ -0.66
HDAC6-215ENST00000465457 TAGLN2P37802 199 aaKnown RBP10.94□□□□□ -0.66
HDAC6-215ENST00000465457 RPL27AP46776 148 aaKnown RBP10.94□□□□□ -0.66
HDAC6-215ENST00000465457 FHITP49789 147 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 RPL15P61313 204 aaKnown RBP10.94□□□□□ -0.66
HDAC6-215ENST00000465457 TEPPQ6URK8 271 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 ZNF114Q8NC26 417 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 NPBQ8NG41 125 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 OR2T10Q8NGZ9 312 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 TMEM170AQ8WVE7 144 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 CFHR4Q92496 578 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 MALSU1Q96EH3 234 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 SEC11CQ9BY50 192 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 ACTR3CQ9C0K3 210 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-215ENST00000465457 RPRMQ9NS64 109 aa10.94□□□□□ -0.66
HDAC6-215ENST00000465457 METTL1Q9UBP6 276 aaKnown RBP10.94□□□□□ -0.66
HDAC6-215ENST00000465457 IGHV3-72A0A0B4J1Y9 119 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 NBR2O15453 112 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 CYB5BO43169 146 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 IFNA1P01562 189 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 SNRNP70P08621 437 aaKnown RBP10.93□□□□□ -0.66
HDAC6-215ENST00000465457 M6PRP20645 277 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 IER3P46695 156 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 AKR1C1Q04828 323 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 KLRD1Q13241 179 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 PMS2P11Q13670 270 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 GUK1Q16774 197 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 FFAR4Q5NUL3 377 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 C10orf91Q5T1B1 145 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 ETFRF1Q6IPR1 90 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 SVBPQ8N300 66 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 SFT2D1Q8WV19 159 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 C16orf95Q9H693 158 aa10.93□□□□□ -0.66
HDAC6-215ENST00000465457 CARHSP1Q9Y2V2 147 aaKnown RBP10.93□□□□□ -0.66
HDAC6-215ENST00000465457 LSM4Q9Y4Z0 139 aaKnown RBP10.93□□□□□ -0.66
HDAC6-215ENST00000465457 CTXND1A0A1B0GTU2 59 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 AGPAT2O15120 278 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 NDUFA3O95167 84 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 BRS3P32247 399 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 ELLP55199 621 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-215ENST00000465457 DLX1P56177 255 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 EBI3Q14213 229 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 PLGLAQ15195 96 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 MMDQ15546 238 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 TNXAQ16473 311 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 SPSB3Q6PJ21 355 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 TMEM144Q7Z5S9 345 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 RCC1LQ96I51 464 aaKnown RBP10.92□□□□□ -0.66
HDAC6-215ENST00000465457 SLC35E1Q96K37 410 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 EIF5A2Q9GZV4 153 aaKnown RBP10.92□□□□□ -0.66
HDAC6-215ENST00000465457 HILPDAQ9Y5L2 63 aa10.92□□□□□ -0.66
HDAC6-215ENST00000465457 MAP1LC3B2A6NCE7 125 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 RBFOX3A6NFN3 312 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 F8W036 122 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 NDUFS6O75380 124 aaKnown RBP10.91□□□□□ -0.66
HDAC6-215ENST00000465457 FAM106CPP0CH98 169 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 MYOD1P15172 320 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
HDAC6-215ENST00000465457 CD69Q07108 199 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 PVRIGQ6DKI7 326 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 OR10G4Q8NGN3 311 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 OR10G9Q8NGN4 311 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 OR10G7Q8NGN6 311 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 GGTLC1Q9BX51 225 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 MAP1LC3BQ9GZQ8 125 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 SLC39A9Q9NUM3 307 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 TENM2Q9NT68 2774 aa10.91□□□□□ -0.66
HDAC6-215ENST00000465457 IGHV1-69DA0A0B4J2H0 117 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 IGLC7A0M8Q6 106 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 K7EIL1 84 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 IGKV1D-33P01593 117 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 IGKV1-33P01594 117 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 IGHV1-69P01742 117 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 APOC3P02656 99 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 SFTA3P0C7M3 94 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 OR13C7P0DN81 318 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 PPT1P50897 306 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 PRB3Q04118 309 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-215ENST00000465457 WT1-ASQ06250 92 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 SSX2Q16385 188 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 MRGPRG-AS1Q2M3A8 158 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 KHDC3LQ587J8 217 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 ARSJQ5FYB0 599 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-215ENST00000465457 LDLRAD2Q5SZI1 272 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 ACSM6Q6P461 480 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 LHFPL4Q7Z7J7 247 aa10.9□□□□□ -0.66
HDAC6-215ENST00000465457 EAF1Q96JC9 268 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms