RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 SPP1P10451 314 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 MIFP14174 115 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 C4BPBP20851 252 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 CRYBB3P26998 211 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 RCVRNP35243 200 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 PPP5CP53041 499 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 RND3P61587 244 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 MLANAQ16655 118 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 MORN3Q6PF18 240 aaPredicted RBP16.38■□□□□ 0.21
USP4-208ENST00000464168 FNDC4Q9H6D8 234 aaPredicted RBP16.38■□□□□ 0.21
USP4-208ENST00000464168 COMMD3Q9UBI1 195 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 X6R8D5 127 aa16.38■□□□□ 0.21
USP4-208ENST00000464168 ELOA3CA0A087WX78 387 aaPredicted RBP16.37■□□□□ 0.21
USP4-208ENST00000464168 SMIM31A0A1B0GVY4 71 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 M0QYG6 137 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 CLN5O75503 358 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 IFNA17P01571 189 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 APOA1P02647 267 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 PI3P19957 117 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 ETV6P41212 452 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 P2RY1P47900 373 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 SUB1P53999 127 aaKnown RBP eCLIP16.37■□□□□ 0.21
USP4-208ENST00000464168 Q6ZTC4 211 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 METTL26Q96S19 204 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 TP53RKQ96S44 253 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 PKHD1P08F94 4074 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 DNAH17Q9UFH2 4485 aa16.37■□□□□ 0.21
USP4-208ENST00000464168 CORTO00230 105 aa16.36■□□□□ 0.21
USP4-208ENST00000464168 ZNF688P0C7X2 276 aa16.36■□□□□ 0.21
USP4-208ENST00000464168 OR4X1Q8NH49 305 aa16.36■□□□□ 0.21
USP4-208ENST00000464168 DCANP1Q8TF63 244 aa16.36■□□□□ 0.21
USP4-208ENST00000464168 RYR1P21817 5038 aa16.36■□□□□ 0.21
USP4-208ENST00000464168 IGHV4-4A0A075B6R2 117 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 TRAV10A0A0B4J240 114 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 IGKV1-17P01599 117 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 PGAM2P15259 253 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 AKR1C2P52895 323 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 PIGPP57054 158 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 CSNK1G2-AS1Q8NCQ2 148 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 ZNF486Q96H40 463 aaPredicted RBP16.35■□□□□ 0.21
USP4-208ENST00000464168 CLEC5AQ9NY25 188 aa16.35■□□□□ 0.21
USP4-208ENST00000464168 ELK1P19419 428 aa16.34■□□□□ 0.21
USP4-208ENST00000464168 OPRK1P41145 380 aa16.34■□□□□ 0.21
USP4-208ENST00000464168 RPL5P46777 297 aaKnown RBP16.34■□□□□ 0.21
USP4-208ENST00000464168 ACTL10Q5JWF8 245 aa16.34■□□□□ 0.21
USP4-208ENST00000464168 LHFPL1Q86WI0 220 aa16.34■□□□□ 0.21
USP4-208ENST00000464168 TMEM230Q96A57 120 aa16.34■□□□□ 0.21
USP4-208ENST00000464168 C3orf85A0A1B0GTC6 90 aa16.33■□□□□ 0.2
USP4-208ENST00000464168 HOXA1P49639 335 aaPredicted RBP16.33■□□□□ 0.2
USP4-208ENST00000464168 BSXQ3C1V8 233 aa16.33■□□□□ 0.2
USP4-208ENST00000464168 TIGITQ495A1 244 aa16.33■□□□□ 0.2
USP4-208ENST00000464168 PDCD10Q9BUL8 212 aa16.33■□□□□ 0.2
USP4-208ENST00000464168 TBC1D24Q9ULP9 559 aa16.33■□□□□ 0.2
USP4-208ENST00000464168 U3KQE9 123 aa16.33■□□□□ 0.2
USP4-208ENST00000464168 ATG12O94817 140 aa16.32■□□□□ 0.2
USP4-208ENST00000464168 RAB40CQ96S21 281 aa16.32■□□□□ 0.2
USP4-208ENST00000464168 RNF126Q9BV68 326 aa16.32■□□□□ 0.2
USP4-208ENST00000464168 A0A0G2JRQ6 117 aa16.31■□□□□ 0.2
USP4-208ENST00000464168 HPGDSO60760 199 aa16.31■□□□□ 0.2
USP4-208ENST00000464168 SP6Q3SY56 376 aa16.31■□□□□ 0.2
USP4-208ENST00000464168 LINC00336Q6ZUF6 198 aa16.31■□□□□ 0.2
USP4-208ENST00000464168 NARS2Q96I59 477 aaKnown RBP16.31■□□□□ 0.2
USP4-208ENST00000464168 ENY2Q9NPA8 101 aa16.31■□□□□ 0.2
USP4-208ENST00000464168 KLK11Q9UBX7 282 aa16.31■□□□□ 0.2
USP4-208ENST00000464168 CELA1Q9UNI1 258 aa16.31■□□□□ 0.2
USP4-208ENST00000464168 NCS1P62166 190 aa16.3■□□□□ 0.2
USP4-208ENST00000464168 DHRS2Q13268 280 aa16.3■□□□□ 0.2
USP4-208ENST00000464168 TRIM16LQ309B1 348 aa16.3■□□□□ 0.2
USP4-208ENST00000464168 C12orf74Q32Q52 190 aa16.3■□□□□ 0.2
USP4-208ENST00000464168 RNASE10Q5GAN6 216 aaKnown RBP16.3■□□□□ 0.2
USP4-208ENST00000464168 Q6ZRM9 215 aa16.3■□□□□ 0.2
USP4-208ENST00000464168 CENPSQ8N2Z9 138 aa16.3■□□□□ 0.2
USP4-208ENST00000464168 TRAV30A0A087WSZ9 112 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 SCGB2A1O75556 95 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 CD3DP04234 171 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 RNASE12Q5GAN4 147 aaKnown RBP16.29■□□□□ 0.2
USP4-208ENST00000464168 PSMG4Q5JS54 123 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 C16orf54Q6UWD8 224 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 ZNF767PQ75MW2 155 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 ARRDC1Q8N5I2 433 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 GLMPQ8WWB7 406 aa16.29■□□□□ 0.2
USP4-208ENST00000464168 RRNAD1Q96FB5 475 aaKnown RBP16.29■□□□□ 0.2
USP4-208ENST00000464168 DEFB131BA0A096LNP1 70 aa16.28■□□□□ 0.2
USP4-208ENST00000464168 A0A1B0GVY2 172 aa16.28■□□□□ 0.2
USP4-208ENST00000464168 IGLC1P0CG04 106 aa16.28■□□□□ 0.2
USP4-208ENST00000464168 UCP1P25874 307 aa16.28■□□□□ 0.2
USP4-208ENST00000464168 AARDQ4LEZ3 155 aa16.28■□□□□ 0.2
USP4-208ENST00000464168 COPZ2Q9P299 210 aa16.28■□□□□ 0.2
USP4-208ENST00000464168 A0A087WXM4 84 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 HELTA6NFD8 242 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 AMBPP02760 352 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 EIF2B2P49770 351 aaKnown RBP16.27■□□□□ 0.2
USP4-208ENST00000464168 SPCS3P61009 180 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 VBP1P61758 197 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 PRSS54Q6PEW0 395 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 OR4D10Q8NGI6 311 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 OR52I2Q8NH67 350 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 VCX3AQ9NNX9 186 aa16.27■□□□□ 0.2
USP4-208ENST00000464168 HTR2BP41595 481 aa16.26■□□□□ 0.19
USP4-208ENST00000464168 AP2S1P53680 142 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms