RNA–Protein interactions for RNA: ENST00000463936.1

RTN4R-204, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-204ENST00000463936 TMEM128Q5BJH2 165 aa10.73□□□□□ -0.69
RTN4R-204ENST00000463936 TMED4Q7Z7H5 227 aa10.73□□□□□ -0.69
RTN4R-204ENST00000463936 OR52E5Q8NH55 327 aa10.73□□□□□ -0.69
RTN4R-204ENST00000463936 SCARB1Q8WTV0 552 aa10.73□□□□□ -0.69
RTN4R-204ENST00000463936 ZNF414Q96IQ9 312 aa10.73□□□□□ -0.69
RTN4R-204ENST00000463936 OVOL2Q9BRP0 275 aa10.73□□□□□ -0.69
RTN4R-204ENST00000463936 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.73□□□□□ -0.69
RTN4R-204ENST00000463936 KMT2AQ03164 3969 aa10.73□□□□□ -0.69
RTN4R-204ENST00000463936 A0A0B4J2A0 478 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 F8W735 103 aaPredicted RBP10.72□□□□□ -0.69
RTN4R-204ENST00000463936 I3L2K1 104 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 ANXA3P12429 323 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 GPR183P32249 361 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 BTCP35070 178 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 SPCS3P61009 180 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 RBMS2Q15434 407 aaKnown RBP10.72□□□□□ -0.69
RTN4R-204ENST00000463936 NMSQ5H8A3 153 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 PVRIGQ6DKI7 326 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 LYZL2Q7Z4W2 148 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 LGI3Q8N145 548 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 UXS1Q8NBZ7 420 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 DYNLRB2Q8TF09 96 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 ATP6V0BQ99437 205 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 PDCD10Q9BUL8 212 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 CACNG5Q9UF02 275 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 SHPKQ9UHJ6 478 aa10.72□□□□□ -0.69
RTN4R-204ENST00000463936 IGHV3-21A0A0B4J1V1 117 aa10.71□□□□□ -0.69
RTN4R-204ENST00000463936 IGHV3-35A0A0C4DH35 117 aa10.71□□□□□ -0.69
RTN4R-204ENST00000463936 TGOLN2O43493 480 aa10.71□□□□□ -0.69
RTN4R-204ENST00000463936 NDUFB6O95139 128 aa10.71□□□□□ -0.69
RTN4R-204ENST00000463936 SRPXP78539 464 aa10.71□□□□□ -0.69
RTN4R-204ENST00000463936 LRTM2Q8N967 370 aa10.71□□□□□ -0.69
RTN4R-204ENST00000463936 C21orf62Q9NYP8 219 aa10.71□□□□□ -0.69
RTN4R-204ENST00000463936 TECRQ9NZ01 308 aaKnown RBP10.71□□□□□ -0.69
RTN4R-204ENST00000463936 LINC00854A0A1B0GVQ3 168 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 ZNF320A2RRD8 509 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 A8MWP6 167 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 BOLA2-SMG1P6H3BVE0 249 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 SCAF4O95104 1147 aaKnown RBP10.7□□□□□ -0.7
RTN4R-204ENST00000463936 SFT2D2O95562 160 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 C8orf88P0DMB2 117 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 SULT1A3P0DMM9 295 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 SULT1A4P0DMN0 295 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 RNASE2P10153 161 aaKnown RBP10.7□□□□□ -0.7
RTN4R-204ENST00000463936 FCGR2BP31994 310 aaPredicted RBP10.7□□□□□ -0.7
RTN4R-204ENST00000463936 PPP1R1AQ13522 171 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 BSXQ3C1V8 233 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 ANKRD55Q3KP44 614 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 MISP3Q96FF7 219 aa10.7□□□□□ -0.7
RTN4R-204ENST00000463936 BSCL2Q96G97 398 aaPredicted RBP10.7□□□□□ -0.7
RTN4R-204ENST00000463936 ZNF436Q9C0F3 470 aaPredicted RBP10.7□□□□□ -0.7
RTN4R-204ENST00000463936 DUXBA0A1W2PPF3 345 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 OR2T8A6NH00 312 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 INMT-MINDY4F8WBC2 141 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 MT-CO2P00403 227 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 VAMP1P23763 118 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 ADMP35318 185 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 SNCAP37840 140 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
RTN4R-204ENST00000463936 UBE2MP61081 183 aaKnown RBP10.69□□□□□ -0.7
RTN4R-204ENST00000463936 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 SPSB3Q6PJ21 355 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 BTNL8Q6UX41 500 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 FLVCR2Q9UPI3 526 aa10.69□□□□□ -0.7
RTN4R-204ENST00000463936 DNAH10Q8IVF4 4471 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 PIGBOS1A0A0B4J2F0 54 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 CCNKO75909 580 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 CTSGP08311 255 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 SUB1P53999 127 aaKnown RBP eCLIP10.68□□□□□ -0.7
RTN4R-204ENST00000463936 MFAP4P55083 255 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 SMCO1Q147U7 214 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 TXN2Q99757 166 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 ENY2Q9NPA8 101 aa10.68□□□□□ -0.7
RTN4R-204ENST00000463936 A0A1B0GU03 582 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 C7orf66A4D0T2 115 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 PITX3O75364 302 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 IGHV3-48P01763 117 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 TCRBP04435 133 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 HTR2BP41595 481 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 EIF2B2P49770 351 aaKnown RBP10.67□□□□□ -0.7
RTN4R-204ENST00000463936 Q56UQ5 140 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 UBAC2Q8NBM4 344 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 OR52B4Q8NGK2 314 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 IL17DQ8TAD2 202 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 PINX1Q96BK5 328 aaKnown RBP10.67□□□□□ -0.7
RTN4R-204ENST00000463936 HSPB7Q9UBY9 170 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 CACFD1Q9UGQ2 172 aa10.67□□□□□ -0.7
RTN4R-204ENST00000463936 C9orf170A2RU37 121 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 CEBPZOSA8MTT3 80 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 CORTO00230 105 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 PRAF2O60831 178 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 JTBO76095 146 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 NXPH3O95157 252 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 SLC25A6P12236 298 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 ELLP55199 621 aaPredicted RBP10.66□□□□□ -0.7
RTN4R-204ENST00000463936 TNFRSF9Q07011 255 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 C2orf83Q53S99 150 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 TMEM170AQ8WVE7 144 aa10.66□□□□□ -0.7
RTN4R-204ENST00000463936 TMEM190Q8WZ59 177 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms