RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 NDUFA4O00483 81 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 GP9P14770 177 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 C4orf46Q504U0 113 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 UBAC2Q8NBM4 344 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 SLC24A4Q8NFF2 622 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 OR1S1Q8NH92 325 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 DTD1Q8TEA8 209 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 NUDT15Q9NV35 164 aa13.37□□□□□ -0.27
VPS52-214ENST00000463486 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
VPS52-214ENST00000463486 FAM90A26D6RGX4 464 aa13.36□□□□□ -0.27
VPS52-214ENST00000463486 TMEM50AO95807 157 aa13.36□□□□□ -0.27
VPS52-214ENST00000463486 ELLP55199 621 aaPredicted RBP13.36□□□□□ -0.27
VPS52-214ENST00000463486 CD300EQ496F6 205 aaPredicted RBP13.36□□□□□ -0.27
VPS52-214ENST00000463486 Q8N1Y9 231 aa13.36□□□□□ -0.27
VPS52-214ENST00000463486 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
VPS52-214ENST00000463486 HIPK2Q9H2X6 1198 aa13.36□□□□□ -0.27
VPS52-214ENST00000463486 GAR1Q9NY12 217 aaKnown RBP13.36□□□□□ -0.27
VPS52-214ENST00000463486 U3KQ87 197 aa13.36□□□□□ -0.27
VPS52-214ENST00000463486 ZNF785A8K8V0 405 aa13.35□□□□□ -0.27
VPS52-214ENST00000463486 DEFB121Q5J5C9 76 aa13.35□□□□□ -0.27
VPS52-214ENST00000463486 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
VPS52-214ENST00000463486 DUSP18Q8NEJ0 188 aa13.35□□□□□ -0.27
VPS52-214ENST00000463486 OR4X1Q8NH49 305 aa13.35□□□□□ -0.27
VPS52-214ENST00000463486 COQ8AQ8NI60 647 aa13.35□□□□□ -0.27
VPS52-214ENST00000463486 MLXQ9UH92 298 aa13.35□□□□□ -0.27
VPS52-214ENST00000463486 FAM240BA0A1B0GVZ2 78 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 K7EMT4 169 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 CLN5O75503 358 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 H2AFB2P0C5Z0 115 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 NPY1RP25929 384 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 NPBWR1P48145 328 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 ID3Q02535 119 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 PRSS54Q6PEW0 395 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 OR4D5Q8NGN0 318 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 OR2K2Q8NGT1 345 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 OR10C1Q96KK4 312 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 SEC22CQ9BRL7 303 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 TECRQ9NZ01 308 aaKnown RBP13.34□□□□□ -0.27
VPS52-214ENST00000463486 UFC1Q9Y3C8 167 aa13.34□□□□□ -0.27
VPS52-214ENST00000463486 IGHV3OR16-8A0A075B7F1 116 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 NUPL2O15504 423 aaKnown RBP13.33□□□□□ -0.28
VPS52-214ENST00000463486 GNG7O60262 68 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 LY86O95711 162 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 IGKV1-17P01599 117 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 OPRK1P41145 380 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 ATP5IP56385 69 aaPredicted RBP13.33□□□□□ -0.28
VPS52-214ENST00000463486 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 MARC2Q969Z3 335 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 MAGT1Q9H0U3 335 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 PALMDQ9NP74 551 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 DAZ1Q9NQZ3 744 aaKnown RBP13.33□□□□□ -0.28
VPS52-214ENST00000463486 MRPL27Q9P0M9 148 aaKnown RBP13.33□□□□□ -0.28
VPS52-214ENST00000463486 SELENOKQ9Y6D0 94 aa13.33□□□□□ -0.28
VPS52-214ENST00000463486 C15orf62A8K5M9 175 aa13.32□□□□□ -0.28
VPS52-214ENST00000463486 SYNGR2O43760 224 aa13.32□□□□□ -0.28
VPS52-214ENST00000463486 IFNA10P01566 189 aa13.32□□□□□ -0.28
VPS52-214ENST00000463486 RELQ04864 619 aaPredicted RBP13.32□□□□□ -0.28
VPS52-214ENST00000463486 TOMM20LQ6UXN7 152 aa13.32□□□□□ -0.28
VPS52-214ENST00000463486 NRARPQ7Z6K4 114 aa13.32□□□□□ -0.28
VPS52-214ENST00000463486 ZNF431Q8TF32 576 aaPredicted RBP13.32□□□□□ -0.28
VPS52-214ENST00000463486 ZFAND3Q9H8U3 227 aa13.32□□□□□ -0.28
VPS52-214ENST00000463486 IGLC1P0CG04 106 aa13.31□□□□□ -0.28
VPS52-214ENST00000463486 IAPPP10997 89 aa13.31□□□□□ -0.28
VPS52-214ENST00000463486 LCN12Q6JVE5 192 aa13.31□□□□□ -0.28
VPS52-214ENST00000463486 NOXA1Q86UR1 476 aa13.31□□□□□ -0.28
VPS52-214ENST00000463486 TMEM61Q8N0U2 210 aa13.31□□□□□ -0.28
VPS52-214ENST00000463486 B9D2Q9BPU9 175 aa13.31□□□□□ -0.28
VPS52-214ENST00000463486 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 ZNF207O43670 478 aaKnown RBP13.3□□□□□ -0.28
VPS52-214ENST00000463486 IFNA21P01568 189 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 IL5P05113 134 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 SLC25A4P12235 298 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 CD69Q07108 199 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 BTNL8Q6UX41 500 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 WDR89Q96FK6 387 aaPredicted RBP13.3□□□□□ -0.28
VPS52-214ENST00000463486 C20orf24Q9BUV8 137 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 SMPXQ9UHP9 88 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 STAB2Q8WWQ8 2551 aa13.3□□□□□ -0.28
VPS52-214ENST00000463486 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 MED6O75586 246 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 RND2P52198 227 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 PAX9P55771 341 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 POLR2GP62487 172 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS52-214ENST00000463486 IAH1Q2TAA2 248 aaPredicted RBP13.29□□□□□ -0.28
VPS52-214ENST00000463486 TIGITQ495A1 244 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 ZNF600Q6ZNG1 722 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 ZBTB8BQ8NAP8 495 aaPredicted RBP13.29□□□□□ -0.28
VPS52-214ENST00000463486 DYNLRB2Q8TF09 96 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 PUS1Q9Y606 427 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS52-214ENST00000463486 SMAD5-AS1Q9Y6J3 95 aa13.29□□□□□ -0.28
VPS52-214ENST00000463486 TENM3Q9P273 2699 aa13.28□□□□□ -0.28
VPS52-214ENST00000463486 IGHV7-4-1A0A0J9YVY3 117 aa13.28□□□□□ -0.28
VPS52-214ENST00000463486 WRBO00258 174 aa13.28□□□□□ -0.28
VPS52-214ENST00000463486 CCSO14618 274 aa13.28□□□□□ -0.28
VPS52-214ENST00000463486 GPX4P36969 197 aaPredicted RBP13.28□□□□□ -0.28
VPS52-214ENST00000463486 NKX2-1P43699 371 aaPredicted RBP13.28□□□□□ -0.28
VPS52-214ENST00000463486 DCTN2Q13561 401 aaKnown RBP13.28□□□□□ -0.28
VPS52-214ENST00000463486 SLC16A13Q7RTY0 426 aa13.28□□□□□ -0.28
VPS52-214ENST00000463486 C12orf45Q8N5I9 185 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms