RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PF4V1P10720 104 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 HBG1P69891 147 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 HBG2P69892 147 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 DEFA5Q01523 94 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 LCNL1Q6ZST4 164 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 TMEM116Q8NCL8 245 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 OR1S2Q8NGQ3 325 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 SCARB1Q8WTV0 552 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 USMG5Q96IX5 58 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 CYTL1Q9NRR1 136 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 ZNF355PQ9NSJ1 428 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
COL6A1-202ENST00000463060 MFSD2BA6NFX1 497 aa11.13□□□□□ -0.63
COL6A1-202ENST00000463060 IGHV3-48P01763 117 aa11.13□□□□□ -0.63
COL6A1-202ENST00000463060 FCGR2BP31994 310 aaPredicted RBP11.13□□□□□ -0.63
COL6A1-202ENST00000463060 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
COL6A1-202ENST00000463060 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
COL6A1-202ENST00000463060 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
COL6A1-202ENST00000463060 TMUB2Q71RG4 321 aa11.13□□□□□ -0.63
COL6A1-202ENST00000463060 SLC16A13Q7RTY0 426 aa11.13□□□□□ -0.63
COL6A1-202ENST00000463060 ZNF491Q8N8L2 437 aa11.13□□□□□ -0.63
COL6A1-202ENST00000463060 FBN1P35555 2871 aaKnown RBP11.13□□□□□ -0.63
COL6A1-202ENST00000463060 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 IGHV3-21A0A0B4J1V1 117 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 RPS10-NUDT3A0A1W2PQS6 291 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 RPLP1P05386 114 aaKnown RBP11.12□□□□□ -0.63
COL6A1-202ENST00000463060 HNRNPCP07910 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
COL6A1-202ENST00000463060 OPRK1P41145 380 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 TPPP2P59282 170 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 ATP5G2Q06055 141 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 FOXL1Q12952 345 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 ETFRF1Q6IPR1 90 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 ZNF343Q6P1L6 599 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 TREML4Q6UXN2 200 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 OR4X1Q8NH49 305 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 ZNF502Q8TBZ5 544 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 CXorf58Q96LI9 332 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 ATP6V0BQ99437 205 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 ATP5SQ99766 215 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 TMEM147Q9BVK8 224 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 NPVFQ9HCQ7 196 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 WDR83OSQ9Y284 106 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 LSM4Q9Y4Z0 139 aaKnown RBP11.12□□□□□ -0.63
COL6A1-202ENST00000463060 ATRQ13535 2644 aa11.12□□□□□ -0.63
COL6A1-202ENST00000463060 IGKV1D-37A0A075B6S9 117 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 TAAR5O14804 337 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 MFAP4P55083 255 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 CLINT1Q14677 625 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 THAP8Q8NA92 274 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 WFDC12Q8WWY7 111 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 CCDC140Q96MF4 163 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 TXN2Q99757 166 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 PARD6GQ9BYG4 376 aaPredicted RBP11.11□□□□□ -0.63
COL6A1-202ENST00000463060 SMIM3Q9BZL3 60 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 ARL6Q9H0F7 186 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 ZC4H2Q9NQZ6 224 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 UQCC1Q9NVA1 299 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 S4R3C0 116 aa11.11□□□□□ -0.63
COL6A1-202ENST00000463060 TRBV7-1A0A0A6YYK4 115 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 BCL2L11O43521 198 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 DFFBO76075 338 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 CD28P10747 220 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 CDX1P47902 265 aaPredicted RBP11.1□□□□□ -0.63
COL6A1-202ENST00000463060 RND2P52198 227 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 ZNF414Q96IQ9 312 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 SLC35E1Q96K37 410 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 ARV1Q9H2C2 271 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 C21orf62Q9NYP8 219 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
COL6A1-202ENST00000463060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.09□□□□□ -0.63
COL6A1-202ENST00000463060 CLN5O75503 358 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 IGKV1-17P01599 117 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 CTSGP08311 255 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 OPCMLQ14982 345 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 RPL7L1Q6DKI1 246 aaKnown RBP11.09□□□□□ -0.63
COL6A1-202ENST00000463060 ACSM6Q6P461 480 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 UBAC2Q8NBM4 344 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 ARPC5LQ9BPX5 153 aa11.09□□□□□ -0.63
COL6A1-202ENST00000463060 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
COL6A1-202ENST00000463060 I3L521 148 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 HAX1O00165 279 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 JTBO76095 146 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 IGHV3-23P01764 117 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 CLEC3BP05452 202 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 IGLC1P0CG04 106 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 NPBWR1P48145 328 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 RUNX1Q01196 453 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 AWAT1Q58HT5 328 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 ACY3Q96HD9 319 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 GNB4Q9HAV0 340 aa11.08□□□□□ -0.64
COL6A1-202ENST00000463060 KANTRA0A1W2PQU2 76 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms