RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 CGB1A6NKQ9 187 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 TEX22C9J3V5 150 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 FCN1O00602 326 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 IFNA7P01567 189 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 IFNA5P01569 189 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 NHLRC4P0CG21 123 aaPredicted RBP12.1□□□□□ -0.47
SF3A3-203ENST00000461869 OR13C7P0DN81 318 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 CX3CL1P78423 397 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 WT1-ASQ06250 92 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 CLINT1Q14677 625 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 ZNF767PQ75MW2 155 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 OR10W1Q8NGF6 305 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 OR1L6Q8NGR2 347 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 ST8SIA2Q92186 375 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
SF3A3-203ENST00000461869 PMS2P5A8MQ11 134 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 E7EUB6 86 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 CORTO00230 105 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 CYB5BO43169 146 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 RNASE2P10153 161 aaKnown RBP12.09□□□□□ -0.47
SF3A3-203ENST00000461869 DLK1P80370 383 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
SF3A3-203ENST00000461869 RPL7L1Q6DKI1 246 aaKnown RBP12.09□□□□□ -0.47
SF3A3-203ENST00000461869 SLC25A24Q6NUK1 477 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 TEX261Q6UWH6 196 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 ZNF329Q86UD4 541 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 BAP18Q8IXM2 172 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 RNASEH2CQ8TDP1 164 aaKnown RBP12.09□□□□□ -0.47
SF3A3-203ENST00000461869 CYTL1Q9NRR1 136 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 ZMAT5Q9UDW3 170 aaKnown RBP12.09□□□□□ -0.47
SF3A3-203ENST00000461869 U3KQK5 164 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 COL7A1Q02388 2944 aa12.09□□□□□ -0.47
SF3A3-203ENST00000461869 IGHV7-81A0A0B4J1V7 117 aa12.08□□□□□ -0.48
SF3A3-203ENST00000461869 A0A1B0GW64 132 aa12.08□□□□□ -0.48
SF3A3-203ENST00000461869 FNDC10F2Z333 226 aa12.08□□□□□ -0.48
SF3A3-203ENST00000461869 RGS13O14921 159 aa12.08□□□□□ -0.48
SF3A3-203ENST00000461869 OR1P1Q8NH06 330 aa12.08□□□□□ -0.48
SF3A3-203ENST00000461869 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
SF3A3-203ENST00000461869 TMEM68Q96MH6 324 aa12.08□□□□□ -0.48
SF3A3-203ENST00000461869 PARD6GQ9BYG4 376 aaPredicted RBP12.08□□□□□ -0.48
SF3A3-203ENST00000461869 UQCC1Q9NVA1 299 aa12.08□□□□□ -0.48
SF3A3-203ENST00000461869 NPIPB5A8MRT5 1133 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 NUDT19A8MXV4 375 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 MYCNOSP40205 109 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 IFITM2Q01629 132 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 C18orf65Q6ZTR6 163 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 HAPLN4Q86UW8 402 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 SCGB1C1Q8TD33 95 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 P2RX4Q99571 388 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 PARP11Q9NR21 331 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
SF3A3-203ENST00000461869 F11RQ9Y624 299 aaKnown RBP12.07□□□□□ -0.48
SF3A3-203ENST00000461869 RPS10-NUDT3A0A1W2PQS6 291 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 PRSS46E5RG02 174 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 AREGP15514 252 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 NDPQ00604 133 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 EXOSC2Q13868 293 aaKnown RBP12.06□□□□□ -0.48
SF3A3-203ENST00000461869 VWC2Q2TAL6 325 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 ETFRF1Q6IPR1 90 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 ZNF680Q8NEM1 530 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 TMEM170AQ8WVE7 144 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 CACNG8Q8WXS5 425 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 GNPNAT1Q96EK6 184 aaPredicted RBP12.06□□□□□ -0.48
SF3A3-203ENST00000461869 GINS3Q9BRX5 216 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 ARV1Q9H2C2 271 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 WFDC1Q9HC57 220 aa12.06□□□□□ -0.48
SF3A3-203ENST00000461869 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 CRYGCP07315 174 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 DEFA4P12838 97 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 CTRB1P17538 263 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 GPX4P36969 197 aaPredicted RBP12.05□□□□□ -0.48
SF3A3-203ENST00000461869 CRIP2P52943 208 aaPredicted RBP12.05□□□□□ -0.48
SF3A3-203ENST00000461869 PVRIGQ6DKI7 326 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 CTRB2Q6GPI1 263 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 KLHL30-AS1Q8NEE0 82 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 SCARB1Q8WTV0 552 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 NOL4LQ96MY1 436 aaPredicted RBP12.05□□□□□ -0.48
SF3A3-203ENST00000461869 HSPB9Q9BQS6 159 aa12.05□□□□□ -0.48
SF3A3-203ENST00000461869 C3orf84H3BNL1 204 aa12.04□□□□□ -0.48
SF3A3-203ENST00000461869 ATP6V0E1O15342 81 aa12.04□□□□□ -0.48
SF3A3-203ENST00000461869 MPDU1O75352 247 aa12.04□□□□□ -0.48
SF3A3-203ENST00000461869 REG1AP05451 166 aa12.04□□□□□ -0.48
SF3A3-203ENST00000461869 SEC11BP0C7V7 166 aa12.04□□□□□ -0.48
SF3A3-203ENST00000461869 TTC9CQ8N5M4 171 aa12.04□□□□□ -0.48
SF3A3-203ENST00000461869 SLC35E1Q96K37 410 aa12.04□□□□□ -0.48
SF3A3-203ENST00000461869 FAM103A1Q9BTL3 118 aaKnown RBP12.04□□□□□ -0.48
SF3A3-203ENST00000461869 SMCO3A2RU48 225 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 SOX15O60248 233 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 CFDP00746 253 aaPredicted RBP12.03□□□□□ -0.48
SF3A3-203ENST00000461869 IGHG2P01859 326 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 APELAP0DMC3 54 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 OPRK1P41145 380 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 AKIRIN2Q53H80 203 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 ALKAL2Q6UX46 152 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 SLC16A13Q7RTY0 426 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 SLC35E3Q7Z769 313 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms