RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 GINS3Q9BRX5 216 aa11.93□□□□□ -0.5
TMEM39A-203ENST00000461654 UBQLN2Q9UHD9 624 aa11.93□□□□□ -0.5
TMEM39A-203ENST00000461654 TET2Q6N021 2002 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-203ENST00000461654 C17orf112F2Z3M2 114 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 MPDU1O75352 247 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 IGF1P05019 195 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 MDKP21741 143 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 FGF7P21781 194 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 CRIP2P52943 208 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 IFITM2Q01629 132 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 PVRIGQ6DKI7 326 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 SCARB1Q8WTV0 552 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 TAF15Q92804 592 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 WDR61Q9GZS3 305 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 ARV1Q9H2C2 271 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 ZNF355PQ9NSJ1 428 aa11.92□□□□□ -0.5
TMEM39A-203ENST00000461654 LINC01548A6NM66 108 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 SEC11BP0C7V7 166 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 RAB14P61106 215 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 TEPPQ6URK8 271 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 BTNL8Q6UX41 500 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 KCNIP2Q9NS61 270 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 WDR83OSQ9Y284 106 aa11.91□□□□□ -0.5
TMEM39A-203ENST00000461654 CLPSL1A2RUU4 121 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 G3V318 75 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 RGS13O14921 159 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 MT-CO2P00403 227 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 CFDP00746 253 aaPredicted RBP11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 ATP6V0CP27449 155 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 MFAP2P55001 183 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 GAMTQ14353 236 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 C19orf35Q6ZS72 473 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 OR2G3Q8NGZ4 309 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 TMED6Q8WW62 240 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 ACY3Q96HD9 319 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 ZNF580Q9UK33 172 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 TIMM9Q9Y5J7 89 aa11.9□□□□□ -0.5
TMEM39A-203ENST00000461654 TNCP24821 2201 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 IGLV11-55A0A075B6I3 123 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 SOX15O60248 233 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 PRH1P02810 166 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 SPP1P10451 314 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 ACSM6Q6P461 480 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 TMEM144Q7Z5S9 345 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 OR2T6Q8NHC8 308 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 LRRC20Q8TCA0 184 aa11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
TMEM39A-203ENST00000461654 H3BUA1 57 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 SCGB2A1O75556 95 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 CAMLGP49069 296 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 RND2P52198 227 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 SLC35B1P78383 322 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 RUNX1Q01196 453 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 MLANAQ16655 118 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 LINC01006Q8NI28 216 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 NPCDR1Q9BY65 106 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 C16orf95Q9H693 158 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 FNDC4Q9H6D8 234 aaPredicted RBP11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 LINC00527Q9UJ94 153 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 FBXL7Q9UJT9 491 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 NBEAL1Q6ZS30 2694 aa11.88□□□□□ -0.51
TMEM39A-203ENST00000461654 ZFP92A6NM28 416 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 UMAD1C9J7I0 102 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 I3L2K1 104 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 OR2J3O76001 311 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 NPBWR1P48145 328 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 RAB5CP51148 216 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 MFAP4P55083 255 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 SERF2P84101 59 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 C19orf54Q5BKX5 351 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 AKR1C8PQ5T2L2 129 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 NECAP1Q8NC96 275 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 RNF141Q8WVD5 230 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 NPIPB3Q92617 1050 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 CXorf58Q96LI9 332 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 FANCD2OSQ96PS1 177 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 CITED1Q99966 193 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 RSG1Q9BU20 258 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 SH3BGRL3Q9H299 93 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 DMRT1Q9Y5R6 373 aa11.87□□□□□ -0.51
TMEM39A-203ENST00000461654 IGHV3-21A0A0B4J1V1 117 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 FAM223BA6NKX1 122 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 K7EIM0 57 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 FABP1P07148 127 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 RHOGP84095 191 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 Q6ZS46 218 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 FAM223AQ8IWN6 122 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 TMEM116Q8NCL8 245 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 VN1R17PQ8TDU5 208 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 NOL4LQ96MY1 436 aaPredicted RBP11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 MS4A10Q96PG2 267 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 ZNF702PQ9H963 129 aa11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 LSM4Q9Y4Z0 139 aaKnown RBP11.86□□□□□ -0.51
TMEM39A-203ENST00000461654 RNF114Q9Y508 228 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms