RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PPP5D1E7EU14 171 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 GPR31O00270 319 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 MFSD11O43934 449 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 PIAS1O75925 651 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 ATG12O94817 140 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 CRYZL1O95825 349 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 DHFRP00374 187 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 CRHP06850 196 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 CYBAP13498 195 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 IDO1P14902 403 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H2BOP23527 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HLA-DMBP28068 263 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 S100GP29377 79 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H2BBP33778 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 GLRXP35754 106 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H2BDP58876 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 SNRPD2P62316 118 aaKnown RBP1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H2BCP62807 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HBA1P69905 142 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 PSPHP78330 225 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 SLC38A11Q08AI6 406 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 TSNQ15631 228 aaKnown RBP1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST2H2BEQ16778 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 CCDC153Q494R4 210 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.2□□□□□ -2.22
HDAC6-212ENST00000461608 RPS19BP1Q86WX3 136 aaKnown RBP1.2□□□□□ -2.22
HDAC6-212ENST00000461608 DEFB119Q8N690 84 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 DYDC1Q8WWB3 177 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H2BHQ93079 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 TOMM6Q96B49 74 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H2BNQ99877 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 HIST1H2BMQ99879 126 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 GINS3Q9BRX5 216 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 DDA1Q9BW61 102 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 MIXL1Q9H2W2 232 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 GINS2Q9Y248 185 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 ERCC6L2Q5T890 1561 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 DNMBPQ6XZF7 1577 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 VWDEQ8N2E2 1590 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 CACNA1GO43497 2377 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 TOPBP1Q92547 1522 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 DISP1Q96F81 1524 aa1.2□□□□□ -2.22
HDAC6-212ENST00000461608 DENND4BO75064 1496 aaPredicted RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 GAPVD1Q14C86 1478 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 MAGI1Q96QZ7 1491 aaPredicted RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TRAV26-2A0A0B4J265 109 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 A0A0D9SEW6 157 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 hADV38S2A0JD32 116 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 GGT3PA6NGU5 568 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TSTD3H0UI37 97 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 HMGB3O15347 200 aaKnown RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 SMIM17P0DL12 118 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 AKR1C3P42330 323 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 ZNF80P51504 273 aaPredicted RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TCTAP57738 103 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 RHOBP62745 196 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TFAMQ00059 246 aaKnown RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 SMCO1Q147U7 214 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 NCOA1Q15788 1441 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 SPANXN3Q5MJ09 141 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TEX36Q5VZQ5 186 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 DCUN1D2Q6PH85 259 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 DHFR2Q86XF0 187 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 PHF13Q86YI8 300 aaPredicted RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM35BQ8NCS4 154 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 OR8B3Q8NGG8 313 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 OR52L1Q8NGH7 329 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM106AQ96A25 262 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 RMND5BQ96G75 393 aaPredicted RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 DERL1Q9BUN8 251 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TMEM147Q9BVK8 224 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 OR8D2Q9GZM6 311 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 CYSTM1Q9H1C7 97 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 CST9LQ9H4G1 147 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 BIN3Q9NQY0 253 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 FBXL12Q9NXK8 326 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 REREQ9P2R6 1566 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 PRNDQ9UKY0 176 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 CYSLTR1Q9Y271 337 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 ERGIC3Q9Y282 383 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 TOP2AP11388 1531 aaKnown RBP1.19□□□□□ -2.22
HDAC6-212ENST00000461608 MTUS2Q5JR59 1369 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 STRCP1A6NGW2 1772 aa1.19□□□□□ -2.22
HDAC6-212ENST00000461608 KDM6BO15054 1643 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 COL5A3P25940 1745 aaPredicted RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 TRGV2A0A075B6R0 118 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 TRAV9-1A0A075B6T8 112 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 hCG_1818297A0A087WSY0 165 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 A0A1B0GVG6 124 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 TRAPPC13A5PLN9 417 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 MAP1LC3B2A6NCE7 125 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 A8MT66 165 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 G3V2T6 193 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 C19orf84I3L1E1 186 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 SDCBPO00560 298 aaPredicted RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 SERPINE1P05121 402 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 RBP1P09455 135 aa1.18□□□□□ -2.22
HDAC6-212ENST00000461608 ERP29P30040 261 aaKnown RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 GTF2A1P52655 376 aaPredicted RBP1.18□□□□□ -2.22
HDAC6-212ENST00000461608 NCALDP61601 193 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms