RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 OR52L1Q8NGH7 329 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 TERB2Q8NHR7 220 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 SLC25A40Q8TBP6 338 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 GNPDA2Q8TDQ7 276 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 C9orf16Q9BUW7 83 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 YIPF3Q9GZM5 350 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 OSTCQ9NRP0 149 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 TVP23BQ9NYZ1 205 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 OPTCQ9UBM4 332 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 MED13Q9UHV7 2174 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 KIF24Q5T7B8 1368 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 RGS12O14924 1447 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 DISP1Q96F81 1524 aa1.29□□□□□ -2.2
VCL-203ENST00000461383 PRRC2BQ5JSZ5 2229 aaKnown RBP1.28□□□□□ -2.2
VCL-203ENST00000461383 FUOMA2VDF0 154 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 C1orf196B1AJZ1 125 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 OR5F1O95221 314 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 ZNF682O95780 498 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 TCL1BO95988 128 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 RPSAP08865 295 aaKnown RBP1.28□□□□□ -2.2
VCL-203ENST00000461383 HOXA6P31267 233 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 CAPZBP47756 277 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 YPEL3P61236 119 aaPredicted RBP1.28□□□□□ -2.2
VCL-203ENST00000461383 LYRM7Q5U5X0 104 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 S100A7AQ86SG5 101 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 OR5A1Q8NGJ0 315 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 PFN4Q8NHR9 129 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 CDC26Q8NHZ8 85 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 C2orf50Q96LR7 162 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 CYSLTR1Q9Y271 337 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 ARL5AQ9Y689 179 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 ROBO3Q96MS0 1386 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 TOPBP1Q92547 1522 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 ARFGEF3Q5TH69 2177 aa1.28□□□□□ -2.2
VCL-203ENST00000461383 MYH10P35580 1976 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 IBA57-AS1B1ANH7 110 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 BUB1B-PAK6H3BSN5 160 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 OR2B3O76000 313 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 CST2P09228 141 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 NEFHP12036 1026 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 KRTAP12-4P60329 112 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 CDC42P60953 191 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 ARF6P62330 175 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 TAF1AQ15573 450 aaPredicted RBP1.27□□□□□ -2.21
VCL-203ENST00000461383 TEX36Q5VZQ5 186 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 Q6Q795 121 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 Q6ZRN7 208 aaPredicted RBP1.27□□□□□ -2.21
VCL-203ENST00000461383 FP248Q71RG6 208 aaPredicted RBP1.27□□□□□ -2.21
VCL-203ENST00000461383 DEFB128Q7Z7B8 93 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 SIGLECL1Q8N7X8 197 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 ZNF563Q8TA94 476 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 Q96M85 177 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 NAA38Q9BRA0 125 aaKnown RBP1.27□□□□□ -2.21
VCL-203ENST00000461383 CCDC94Q9BW85 323 aaPredicted RBP1.27□□□□□ -2.21
VCL-203ENST00000461383 MRPL32Q9BYC8 188 aaKnown RBP1.27□□□□□ -2.21
VCL-203ENST00000461383 STOML2Q9UJZ1 356 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 ALPK2Q86TB3 2170 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 EML6Q6ZMW3 1958 aa1.27□□□□□ -2.21
VCL-203ENST00000461383 OBSL1O75147 1896 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 RIC1Q4ADV7 1423 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 A0A087X0T9 212 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 TRBV6-5A0A0K0K1A5 114 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 IGKV2-29A2NJV5 120 aaPredicted RBP1.26□□□□□ -2.21
VCL-203ENST00000461383 TRAPPC13A5PLN9 417 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 TMEM212A6NML5 194 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 HMGB3O15347 200 aaKnown RBP1.26□□□□□ -2.21
VCL-203ENST00000461383 CYB5BO43169 146 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 ZNF705BP0CI00 300 aaPredicted RBP1.26□□□□□ -2.21
VCL-203ENST00000461383 CRYGAP11844 174 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 SPI1P17947 270 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 G6PCP35575 357 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 RHEBQ15382 184 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 NNATQ16517 81 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 Q1T7F1 81 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 HACD4Q5VWC8 232 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 OR4D11Q8NGI4 311 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 OR10X1Q8NGY0 326 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 FAM172AQ8WUF8 416 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 SERPINI1Q99574 410 aa1.26□□□□□ -2.21
VCL-203ENST00000461383 PAIP2Q9BPZ3 127 aaKnown RBP1.26□□□□□ -2.21
VCL-203ENST00000461383 FBN1P35555 2871 aaKnown RBP1.26□□□□□ -2.21
VCL-203ENST00000461383 ADGRL3Q9HAR2 1447 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 SCN8AQ9UQD0 1980 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 TRAV14DV4A0A0A6YYC5 116 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 FAM159BA6NKW6 160 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 CLDN25C9JDP6 229 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 OR2J2O76002 312 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 COX6A1P12074 109 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 SERPINB9P50453 376 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 CTAG1AP78358 180 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 SPANXN5Q5MJ07 72 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 PXT1Q8NFP0 134 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 OR11H6Q8NGC7 330 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 OR52R1Q8NGF1 315 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 OR8D4Q8NGM9 314 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 GPR146Q96CH1 333 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 ARMC1Q9NVT9 282 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 AMMECR1Q9Y4X0 333 aaPredicted RBP1.25□□□□□ -2.21
VCL-203ENST00000461383 LHFPL6Q9Y693 200 aa1.25□□□□□ -2.21
VCL-203ENST00000461383 PCF11O94913 1555 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms