RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 OPRK1P41145 380 aa16.9■□□□□ 0.3
TRAF4-207ENST00000461195 SMCO1Q147U7 214 aa16.9■□□□□ 0.3
TRAF4-207ENST00000461195 SLC16A13Q7RTY0 426 aa16.9■□□□□ 0.3
TRAF4-207ENST00000461195 ZNF414Q96IQ9 312 aa16.9■□□□□ 0.3
TRAF4-207ENST00000461195 NAP1L6A6NFF2 107 aa16.89■□□□□ 0.29
TRAF4-207ENST00000461195 ZNF207O43670 478 aaKnown RBP16.89■□□□□ 0.29
TRAF4-207ENST00000461195 NXPH3O95157 252 aa16.89■□□□□ 0.29
TRAF4-207ENST00000461195 VAMP1P23763 118 aa16.89■□□□□ 0.29
TRAF4-207ENST00000461195 RBMS2Q15434 407 aaKnown RBP16.89■□□□□ 0.29
TRAF4-207ENST00000461195 ANKRD55Q3KP44 614 aa16.89■□□□□ 0.29
TRAF4-207ENST00000461195 DUXBA0A1W2PPF3 345 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 OR11H12B2RN74 326 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 C2orf83Q53S99 150 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 CENPSQ8N2Z9 138 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 SLC24A4Q8NFF2 622 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 OR52B4Q8NGK2 314 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 OR10C1Q96KK4 312 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 RCHY1Q96PM5 261 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 SDHCQ99643 169 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-207ENST00000461195 TM2D3Q9BRN9 247 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 HIPK2Q9H2X6 1198 aa16.88■□□□□ 0.29
TRAF4-207ENST00000461195 FNDC4Q9H6D8 234 aaPredicted RBP16.88■□□□□ 0.29
TRAF4-207ENST00000461195 TMEM50AO95807 157 aa16.87■□□□□ 0.29
TRAF4-207ENST00000461195 TNFRSF9Q07011 255 aa16.87■□□□□ 0.29
TRAF4-207ENST00000461195 LAMTOR1Q6IAA8 161 aa16.87■□□□□ 0.29
TRAF4-207ENST00000461195 DEFB125Q8N687 156 aa16.87■□□□□ 0.29
TRAF4-207ENST00000461195 HSPB7Q9UBY9 170 aa16.87■□□□□ 0.29
TRAF4-207ENST00000461195 SMPXQ9UHP9 88 aa16.87■□□□□ 0.29
TRAF4-207ENST00000461195 A0A1B0GU03 582 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 RPS10-NUDT3A0A1W2PQS6 291 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 SFT2D2O95562 160 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 PPP1R1AQ13522 171 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 MLANAQ16655 118 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 HAGHQ16775 308 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 ZNF600Q6ZNG1 722 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 LRTM2Q8N967 370 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 OR4X1Q8NH49 305 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 RNASEH2CQ8TDP1 164 aaKnown RBP16.86■□□□□ 0.29
TRAF4-207ENST00000461195 SPAG8Q99932 426 aaPredicted RBP16.86■□□□□ 0.29
TRAF4-207ENST00000461195 WFDC10AQ9H1F0 79 aa16.86■□□□□ 0.29
TRAF4-207ENST00000461195 IGHV7-4-1A0A0J9YVY3 117 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 LINC00854A0A1B0GVQ3 168 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 CENPXA8MT69 81 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 TSPAN4O14817 238 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 CLN5O75503 358 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 SCGB2A1O75556 95 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 UBE2MP61081 183 aaKnown RBP16.85■□□□□ 0.29
TRAF4-207ENST00000461195 TOMM20LQ6UXN7 152 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 NOXA1Q86UR1 476 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 TMEM116Q8NCL8 245 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 OR1S1Q8NH92 325 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 GINS3Q9BRX5 216 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 SRD5A3Q9H8P0 318 aa16.85■□□□□ 0.29
TRAF4-207ENST00000461195 MRPL36Q9P0J6 103 aaKnown RBP16.85■□□□□ 0.29
TRAF4-207ENST00000461195 HUWE1Q7Z6Z7 4374 aaKnown RBP16.84■□□□□ 0.29
TRAF4-207ENST00000461195 TRAV14DV4A0A0A6YYC5 116 aa16.84■□□□□ 0.29
TRAF4-207ENST00000461195 NDUFB6O95139 128 aa16.84■□□□□ 0.29
TRAF4-207ENST00000461195 IL7P13232 177 aa16.84■□□□□ 0.29
TRAF4-207ENST00000461195 NPY1RP25929 384 aa16.84■□□□□ 0.29
TRAF4-207ENST00000461195 LINC00322Q6ZN03 302 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-207ENST00000461195 DTD1Q8TEA8 209 aa16.84■□□□□ 0.29
TRAF4-207ENST00000461195 C7orf50Q9BRJ6 194 aaKnown RBP16.84■□□□□ 0.29
TRAF4-207ENST00000461195 RHPN1-AS1Q9BWJ2 59 aa16.84■□□□□ 0.29
TRAF4-207ENST00000461195 RBKSQ9H477 322 aa16.84■□□□□ 0.29
TRAF4-207ENST00000461195 PUS1Q9Y606 427 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRAF4-207ENST00000461195 CHEK1O14757 476 aa16.83■□□□□ 0.28
TRAF4-207ENST00000461195 TMEM170AQ8WVE7 144 aa16.83■□□□□ 0.28
TRAF4-207ENST00000461195 SPATA25Q9BR10 227 aa16.83■□□□□ 0.28
TRAF4-207ENST00000461195 U3KQ87 197 aa16.83■□□□□ 0.28
TRAF4-207ENST00000461195 TRAV30A0A087WSZ9 112 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 IGHV3-49A0A0A0MS15 119 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 IFNA10P01566 189 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 SLC25A4P12235 298 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 SLC25A6P12236 298 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 RNF2Q99496 336 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 ZFAND3Q9H8U3 227 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 TMED3Q9Y3Q3 217 aa16.82■□□□□ 0.28
TRAF4-207ENST00000461195 STAB2Q8WWQ8 2551 aa16.81■□□□□ 0.28
TRAF4-207ENST00000461195 RBMY1BA6NDE4 496 aaKnown RBP16.81■□□□□ 0.28
TRAF4-207ENST00000461195 RBMY1EA6NEQ0 496 aaKnown RBP16.81■□□□□ 0.28
TRAF4-207ENST00000461195 PITX3O75364 302 aa16.81■□□□□ 0.28
TRAF4-207ENST00000461195 RBMY1DP0C7P1 496 aaKnown RBP16.81■□□□□ 0.28
TRAF4-207ENST00000461195 BMI1P35226 326 aa16.81■□□□□ 0.28
TRAF4-207ENST00000461195 ETFRF1Q6IPR1 90 aa16.81■□□□□ 0.28
TRAF4-207ENST00000461195 PRSS54Q6PEW0 395 aa16.81■□□□□ 0.28
TRAF4-207ENST00000461195 BTCP35070 178 aa16.8■□□□□ 0.28
TRAF4-207ENST00000461195 FLVCR2Q9UPI3 526 aa16.8■□□□□ 0.28
TRAF4-207ENST00000461195 C9orf170A2RU37 121 aa16.79■□□□□ 0.28
TRAF4-207ENST00000461195 OR4C46A6NHA9 309 aa16.79■□□□□ 0.28
TRAF4-207ENST00000461195 IGKV1-17P01599 117 aa16.79■□□□□ 0.28
TRAF4-207ENST00000461195 HOXB5P09067 269 aa16.79■□□□□ 0.28
TRAF4-207ENST00000461195 RND2P52198 227 aa16.79■□□□□ 0.28
TRAF4-207ENST00000461195 ATP5IP56385 69 aaPredicted RBP16.79■□□□□ 0.28
TRAF4-207ENST00000461195 TIGITQ495A1 244 aa16.79■□□□□ 0.28
TRAF4-207ENST00000461195 OR1S2Q8NGQ3 325 aa16.79■□□□□ 0.28
TRAF4-207ENST00000461195 IGHV3OR16-13A0A075B7E8 117 aa16.78■□□□□ 0.28
TRAF4-207ENST00000461195 IGHV3-74A0A0B4J1X5 117 aa16.78■□□□□ 0.28
TRAF4-207ENST00000461195 FAM90A26D6RGX4 464 aa16.78■□□□□ 0.28
TRAF4-207ENST00000461195 MED6O75586 246 aa16.77■□□□□ 0.28
TRAF4-207ENST00000461195 CD5P06127 495 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms