RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 KLK15Q9H2R5 256 aa4.36□□□□□ -1.71
PTPN12-209ENST00000460731 PARP11Q9NR21 331 aa4.36□□□□□ -1.71
PTPN12-209ENST00000460731 MGAT4CQ9UBM8 478 aa4.36□□□□□ -1.71
PTPN12-209ENST00000460731 RCL1Q9Y2P8 373 aaKnown RBP4.36□□□□□ -1.71
PTPN12-209ENST00000460731 F11RQ9Y624 299 aaKnown RBP4.36□□□□□ -1.71
PTPN12-209ENST00000460731 WSB1Q9Y6I7 421 aa4.36□□□□□ -1.71
PTPN12-209ENST00000460731 U3KQ87 197 aa4.36□□□□□ -1.71
PTPN12-209ENST00000460731 FAM223BA6NKX1 122 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 PMS2P5A8MQ11 134 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 PRSS46E5RG02 174 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 I3L2K1 104 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 I3L521 148 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 IFNA17P01571 189 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 HIST1H1BP16401 226 aaKnown RBP4.35□□□□□ -1.71
PTPN12-209ENST00000460731 HTR2BP41595 481 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 NKX2-1P43699 371 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-209ENST00000460731 GNB1P62873 340 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 SLC35B1P78383 322 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 ERHP84090 104 aaKnown RBP4.35□□□□□ -1.71
PTPN12-209ENST00000460731 FCN2Q15485 313 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 C9orf152Q5JTZ5 239 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 FAM209BQ5JX69 171 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 ZNF343Q6P1L6 599 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 GSG1LQ6UXU4 331 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 ZNF329Q86UD4 541 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 FAM223AQ8IWN6 122 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 OR1S1Q8NH92 325 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 VN1R17PQ8TDU5 208 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 CIB3Q96Q77 187 aaPredicted RBP4.35□□□□□ -1.71
PTPN12-209ENST00000460731 RBKSQ9H477 322 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 PLEKHA3Q9HB20 300 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 LINC00527Q9UJ94 153 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 NOTCH1P46531 2555 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 DNHD1Q96M86 4753 aa4.35□□□□□ -1.71
PTPN12-209ENST00000460731 A0A0G2JLM5 398 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 C15orf62A8K5M9 175 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 FNDC10F2Z333 226 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 G3V3Q6 166 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 H0YIZ8 118 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 K7EIM0 57 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 K7EPK0 472 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 CCSO14618 274 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 TSC22D2O75157 780 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 DEDDO75618 318 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 OPN1MWP04001 364 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 GIPP09681 153 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 OPN1MW2P0DN77 364 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 OPN1MW3P0DN78 364 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 CD28P10747 220 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 GPX4P36969 197 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 POLR2GP62487 172 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 RPL23AP62750 156 aaKnown RBP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 FHL3Q13643 280 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 TMEM14EPQ6UXP3 125 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 NOXA1Q86UR1 476 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 NDUFA11Q86Y39 141 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 LILRB2Q8N423 598 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 OR5T1Q8NG75 326 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 RNASE11Q8TAA1 199 aaKnown RBP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 RNASEH2CQ8TDP1 164 aaKnown RBP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 DTD1Q8TEA8 209 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 CACNG8Q8WXS5 425 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 TXN2Q99757 166 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 ZNF436Q9C0F3 470 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 MED28Q9H204 178 aa4.34□□□□□ -1.71
PTPN12-209ENST00000460731 TSSC4Q9Y5U2 329 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-209ENST00000460731 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.33□□□□□ -1.72
PTPN12-209ENST00000460731 TRBV7-1A0A0A6YYK4 115 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 C13orf42A0A1B0GVH6 325 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 C5orf51A6NDU8 294 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 B5MCH6 92 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 CORTO00230 105 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 GOSR2O14653 212 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 CYB5BO43169 146 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 SSNA1O43805 119 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 NDUFB8O95169 186 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 SIX6O95475 246 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 MPC2O95563 127 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 SLC25A4P12235 298 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 SNCAP37840 140 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 SUB1P53999 127 aaKnown RBP eCLIP4.33□□□□□ -1.72
PTPN12-209ENST00000460731 RAP2BP61225 183 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 RHOGP84095 191 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 RAB32Q13637 225 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 ECSCRQ19T08 205 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 TMEM65Q6PI78 240 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 UXS1Q8NBZ7 420 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 WFDC9Q8NEX5 89 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 SLC24A4Q8NFF2 622 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 OR4X2Q8NGF9 303 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 ZNF502Q8TBZ5 544 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 PPP1R1CQ8WVI7 109 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 C4orf3Q8WVX3 66 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 CXorf58Q96LI9 332 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 OR4C12Q96R67 309 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 CITED2Q99967 270 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-209ENST00000460731 PDCD10Q9BUL8 212 aa4.33□□□□□ -1.72
PTPN12-209ENST00000460731 HIPK2Q9H2X6 1198 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms