RNA–Protein interactions for RNA: ENST00000460658.5

SMTN-213, Transcript of smoothelin, humanhuman

TSL 5

Gene SMTN, Length 5,080 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-213ENST00000460658 CHD5Q8TDI0 1954 aa11.7□□□□□ -0.54
SMTN-213ENST00000460658 SNRPCP09234 159 aaKnown RBP11.7□□□□□ -0.54
SMTN-213ENST00000460658 BSPH1Q075Z2 132 aa11.7□□□□□ -0.54
SMTN-213ENST00000460658 FAM27E3Q08E93 113 aa11.7□□□□□ -0.54
SMTN-213ENST00000460658 NXT2Q9NPJ8 142 aaKnown RBP11.7□□□□□ -0.54
SMTN-213ENST00000460658 ZSWIM8A7E2V4 1837 aa11.7□□□□□ -0.54
SMTN-213ENST00000460658 ZNF56Q15929 161 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 FBLN7Q53RD9 439 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 CASP8AP2Q9UKL3 1982 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 MYOFQ9NZM1 2061 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 FNDC10F2Z333 226 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 DUX5Q96PT3 197 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 A8MWV9 139 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 OOSP1A8MZH6 123 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 SRRM5B3KS81 715 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 ZNHIT1O43257 154 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 TMEM170BQ5T4T1 132 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 NPFFO15130 113 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 CEACAM4O75871 244 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 IGKV1D-33P01593 117 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 IGKV1-33P01594 117 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 MRPL52Q86TS9 123 aaKnown RBP11.69□□□□□ -0.54
SMTN-213ENST00000460658 NRN1Q9NPD7 142 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 ZNF318Q5VUA4 2279 aa11.69□□□□□ -0.54
SMTN-213ENST00000460658 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 SLC25A20O43772 301 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 NMSQ5H8A3 153 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 LDLRAD2Q5SZI1 272 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 ATOH7Q8N100 152 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 H3BRM9 83 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 H3BUT2 72 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 TFPI2P48307 235 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 TEX38Q6PEX7 206 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 WNT10AQ9GZT5 417 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 SBF1O95248 1867 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 TRAV8-4A0A0B4J246 113 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 TIMP3P35625 211 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 SUPT4H1P63272 117 aaKnown RBP11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 SPTA1P02549 2419 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 MYOD1P15172 320 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 TSKUQ8WUA8 353 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 WFDC1Q9HC57 220 aa11.68□□□□□ -0.54
SMTN-213ENST00000460658 APOMO95445 188 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 FOXA3P55318 350 aaPredicted RBP11.67□□□□□ -0.54
SMTN-213ENST00000460658 EFNB3Q15768 340 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 ZNF562Q6V9R5 426 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 GGNQ86UU5 652 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 TMEM160Q9NX00 188 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 RPUSD1Q9UJJ7 312 aaKnown RBP11.67□□□□□ -0.54
SMTN-213ENST00000460658 GREB1Q4ZG55 1949 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 TRAV9-2A0A087WT02 112 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 F2Z2F3 143 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 TMEM14EPQ6UXP3 125 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 C14orf144Q96I85 54 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 CGB1A6NKQ9 187 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.67□□□□□ -0.54
SMTN-213ENST00000460658 SERF1AO75920 110 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 QRFPP83859 136 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 SCGB3A1Q96QR1 104 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 CCL19Q99731 98 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 FOXC2Q99958 501 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 PLSCR4Q9NRQ2 329 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 SMPXQ9UHP9 88 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 IGKV1-12A0A0C4DH73 117 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 COLCA2A8K830 154 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 C9orf172C9J069 976 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 IGKV1D-12P01611 117 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 CLPSP04118 112 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 S100A7L2Q5SY68 101 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 LHFPL4Q7Z7J7 247 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 ATRXP46100 2492 aa11.67□□□□□ -0.54
SMTN-213ENST00000460658 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 DEPPQ9NTK1 212 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 C8orf46Q8TAG6 207 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 MS4A6AQ9H2W1 248 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 PNRC2Q9NPJ4 139 aaKnown RBP11.66□□□□□ -0.54
SMTN-213ENST00000460658 H3BTX0 84 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 GPR183P32249 361 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 TNFRSF18Q9Y5U5 241 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 EFNA2O43921 213 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 SEC11AP67812 179 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 REG4Q9BYZ8 158 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 COX11Q9Y6N1 276 aa11.66□□□□□ -0.54
SMTN-213ENST00000460658 IGKV1D-8A0A087WSZ0 117 aa11.65□□□□□ -0.54
SMTN-213ENST00000460658 TRAV21A0A0B4J279 112 aa11.65□□□□□ -0.54
SMTN-213ENST00000460658 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms