RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 ZNF207O43670 478 aaKnown RBP12.22□□□□□ -0.45
PTPRU-205ENST00000460170 FAM106AQ4KMX7 169 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 COQ2Q96H96 371 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 HS3ST6Q96QI5 342 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 TMEM70Q9BUB7 260 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 SOX21Q9Y651 276 aaPredicted RBP12.22□□□□□ -0.45
PTPRU-205ENST00000460170 ARPC1AQ92747 370 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 OSTCQ9NRP0 149 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 ZNF257Q9Y2Q1 563 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 PCP4P48539 62 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 IGHV3-23P01764 117 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 DLX1P56177 255 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 Q6ZRM9 215 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 DCAF16Q9NXF7 216 aa12.22□□□□□ -0.45
PTPRU-205ENST00000460170 IGHG3P01860 377 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 ADCYAP1P18509 176 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 ATXN7O15265 892 aaPredicted RBP12.21□□□□□ -0.45
PTPRU-205ENST00000460170 MLNRO43193 412 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 HIGD1CA8MV81 97 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 NBR2O15453 112 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 SERF1AO75920 110 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 PYYP10082 97 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 PRB3Q04118 309 aaPredicted RBP12.21□□□□□ -0.45
PTPRU-205ENST00000460170 TMEM136Q6ZRR5 245 aa12.21□□□□□ -0.45
PTPRU-205ENST00000460170 WNK2Q9Y3S1 2297 aa12.21□□□□□ -0.46
PTPRU-205ENST00000460170 IGHV3OR16-10A0A075B7F0 116 aa12.21□□□□□ -0.46
PTPRU-205ENST00000460170 LINC00473A8K010 186 aa12.21□□□□□ -0.46
PTPRU-205ENST00000460170 C1QL4Q86Z23 238 aa12.21□□□□□ -0.46
PTPRU-205ENST00000460170 OR10W1Q8NGF6 305 aa12.21□□□□□ -0.46
PTPRU-205ENST00000460170 A0A1B0GV90 55 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 COL6A6A6NMZ7 2263 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 LYNX1G3V0Z9 82 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 GPX1P07203 203 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 LYNX1P0DP58 116 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 PSMB2P49721 201 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 MST1LQ2TV78 715 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 ZNF502Q8TBZ5 544 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
PTPRU-205ENST00000460170 NUDT3O95989 172 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 ADMP35318 185 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 GNG5P63218 68 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 VKORC1Q9BQB6 163 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 OTORQ9NRC9 128 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 UQCRFS1P47985 274 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 CTAG1AP78358 180 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 CIARTQ8N365 385 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-205ENST00000460170 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 GPR183P32249 361 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 RSPO1Q2MKA7 263 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-205ENST00000460170 MBD3L4A6NDZ8 208 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-205ENST00000460170 MBD3L3A6NE82 208 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-205ENST00000460170 MBD3L5A6NJ08 208 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-205ENST00000460170 TRGV3P03979 118 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 FAM19A2Q8N3H0 131 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 MBD3L2Q8NHZ7 208 aaPredicted RBP12.19□□□□□ -0.46
PTPRU-205ENST00000460170 TNFRSF14Q92956 283 aa12.19□□□□□ -0.46
PTPRU-205ENST00000460170 IGHV3-49A0A0A0MS15 119 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 TRAV3A0A0B4J244 114 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 COX6B1P14854 86 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 IGKV3-15P01624 115 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 SYT8Q8NBV8 401 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 MBNL3Q9NUK0 354 aaKnown RBP12.18□□□□□ -0.46
PTPRU-205ENST00000460170 Q6AWC8 147 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 IGKV1D-17A0A075B6S4 117 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 ZNF585BQ52M93 769 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 C10orf55Q5SWW7 151 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 PRELID3AQ96N28 172 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 HIST1H2BLQ99880 126 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 LEMD1Q68G75 181 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 MGST2Q99735 147 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 CHODLQ9H9P2 273 aa12.18□□□□□ -0.46
PTPRU-205ENST00000460170 TRBV20OR9-2A0A075B6H5 130 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 SNCGO76070 127 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 PVRIGQ6DKI7 326 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 LINC01551Q86U37 167 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 DENND4CQ5VZ89 1909 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 DIDO1Q9BTC0 2240 aaKnown RBP12.17□□□□□ -0.46
PTPRU-205ENST00000460170 IGHV3OR16-8A0A075B7F1 116 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 HIST3H2BBQ8N257 126 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 NRN1Q9NPD7 142 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 A0A1B0GW15 77 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 K7ERU9 68 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 LINC00205P59089 165 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 AGMATQ9BSE5 352 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 SEPSECSQ9HD40 501 aaKnown RBP12.17□□□□□ -0.46
PTPRU-205ENST00000460170 GAGE10A6NGK3 116 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 APOHP02749 345 aaPredicted RBP12.17□□□□□ -0.46
PTPRU-205ENST00000460170 SRSF6Q13247 344 aaKnown RBP12.17□□□□□ -0.46
PTPRU-205ENST00000460170 SPATA31B1PQ5VZV4 182 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 RNF125Q96EQ8 232 aa12.17□□□□□ -0.46
PTPRU-205ENST00000460170 M0R3E3 92 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 JOSD1Q15040 202 aaPredicted RBP12.16□□□□□ -0.46
PTPRU-205ENST00000460170 TMEM200BQ69YZ2 307 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 SPACA3Q8IXA5 215 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 LIME1Q9H400 295 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 IGHV3-66A0A0C4DH42 116 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms