RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 HRKO00198 91 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 PLSCR4Q9NRQ2 329 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 TOMM7Q9P0U1 55 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 LINC00312Q9Y6C7 94 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 NAPSAO96009 420 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 SRSF1Q07955 248 aaKnown RBP eCLIP7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 ACP7Q6ZNF0 438 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 FER1L6-AS1Q8NA97 138 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 FOXC2Q99958 501 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 TM2D1Q9BX74 207 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 RSPO3Q9BXY4 272 aaPredicted RBP7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 IFI27L2Q9H2X8 130 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 PILRBQ9UKJ0 227 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 OTX1P32242 354 aaPredicted RBP7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 ATP5L2Q7Z4Y8 100 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 APCDD1LQ8NCL9 501 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 PRADC1Q9BSG0 188 aa7.54□□□□□ -1.2
SHROOM4-203ENST00000460112 FAM166AQ6J272 317 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 SLC25A38Q96DW6 304 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 DOPEY1Q5JWR5 2465 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 IFITM2Q01629 132 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 HIVEP3Q5T1R4 2406 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 SPINT1O43278 529 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 ZG16O60844 167 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 IGKV1D-33P01593 117 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 IGKV1-33P01594 117 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 C2orf68Q2NKX9 166 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 UPK2O00526 184 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 CCDC168Q8NDH2 2452 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 BIVMQ86UB2 503 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 TPRX1Q8N7U7 411 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 SP7Q8TDD2 431 aaPredicted RBP7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 CST9LQ9H4G1 147 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 LGALS1P09382 135 aaKnown RBP7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 VSIG10L2P0DP72 767 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 ATXN8Q156A1 80 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 IL36BQ9NZH7 164 aa7.53□□□□□ -1.2
SHROOM4-203ENST00000460112 TMEM249Q2WGJ8 235 aa7.52□□□□□ -1.2
SHROOM4-203ENST00000460112 POC1AQ8NBT0 407 aa7.52□□□□□ -1.2
SHROOM4-203ENST00000460112 SMPXQ9UHP9 88 aa7.52□□□□□ -1.2
SHROOM4-203ENST00000460112 IZUMO1RA6ND01 250 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 EFEMP2O95967 443 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 APOHP02749 345 aaPredicted RBP7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 OR9G4Q8NGQ1 327 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 ZNF257Q9Y2Q1 563 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 PEBP1P30086 187 aaKnown RBP7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 TRAV8-4A0A0B4J246 113 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 TMEM238C9JI98 176 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 NBR2O15453 112 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 NBEAP1P0C6P0 100 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 CSRP3P50461 194 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 ICAM4Q14773 271 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 LHFPL6Q9Y693 200 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 PGPEP1LA6NFU8 196 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 GPR183P32249 361 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 SAP25Q8TEE9 199 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 ORAOV1Q8WV07 137 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 WNT10AQ9GZT5 417 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 KLHDC2Q9Y2U9 406 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 A0A1W2PRS3 328 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 TRGV4A0A0C4DH28 118 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 KBTBD11-OT1A0A1B0GTJ5 212 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 F2Z2F3 143 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 UCP1P25874 307 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 NANOS3P60323 173 aaKnown RBP7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 TMEM187Q14656 261 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 PCOLCEQ15113 449 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 ST6GALNAC3Q8NDV1 305 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 NPIPB3Q92617 1050 aa7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 FOXA2Q9Y261 457 aaPredicted RBP7.52□□□□□ -1.21
SHROOM4-203ENST00000460112 GRIFINA4D1Z8 144 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 TDGF1P3P51864 188 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 ZNF826PQ6ZT77 177 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 OR4D11Q8NGI4 311 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 PLPPR1Q8TBJ4 325 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 METRNQ9UJH8 293 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 C5orf66Q9H5L9 145 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 ZNF362Q5T0B9 420 aaPredicted RBP7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 OR52E5Q8NH55 327 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 TCRBV4S1A1TA0A5B7 111 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 IGKV1D-16P01601 117 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 TPTE2P1Q5T6R2 138 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 MRPL20Q9BYC9 149 aaKnown RBP7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 OVOL1O14753 267 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 MDKP21741 143 aaPredicted RBP7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 ZPLD1Q8TCW7 415 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 GNB1LQ9BYB4 327 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 ZFYVE26Q68DK2 2539 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 A0A1W2PQF6 199 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 SP9P0CG40 484 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 BSPH1Q075Z2 132 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 SRSF6Q13247 344 aaKnown RBP7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 CT83Q5H943 113 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 CTHRC1Q96CG8 243 aa7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 SEPSECSQ9HD40 501 aaKnown RBP7.51□□□□□ -1.21
SHROOM4-203ENST00000460112 H3BUT2 72 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms