RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 DUSP18Q8NEJ0 188 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 IL22RA2Q969J5 263 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 TMEM230Q96A57 120 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 CITED4Q96RK1 184 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 WFDC10AQ9H1F0 79 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 SRD5A3Q9H8P0 318 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 CACFD1Q9UGQ2 172 aa12.08□□□□□ -0.48
COL7A1-203ENST00000459756 KMT2CQ8NEZ4 4911 aaKnown RBP12.08□□□□□ -0.48
COL7A1-203ENST00000459756 DNAH7Q8WXX0 4024 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 IGHV3OR16-8A0A075B7F1 116 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 RBMY1BA6NDE4 496 aaKnown RBP12.07□□□□□ -0.48
COL7A1-203ENST00000459756 RBMY1EA6NEQ0 496 aaKnown RBP12.07□□□□□ -0.48
COL7A1-203ENST00000459756 TSPAN4O14817 238 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 LYRM1O43325 122 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 YIF1AO95070 293 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 RBMY1DP0C7P1 496 aaKnown RBP12.07□□□□□ -0.48
COL7A1-203ENST00000459756 RBMS2Q15434 407 aaKnown RBP12.07□□□□□ -0.48
COL7A1-203ENST00000459756 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 GPR146Q96CH1 333 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 ZNF414Q96IQ9 312 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 OR10C1Q96KK4 312 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 C7orf50Q9BRJ6 194 aaKnown RBP12.07□□□□□ -0.48
COL7A1-203ENST00000459756 CACNG5Q9UF02 275 aa12.07□□□□□ -0.48
COL7A1-203ENST00000459756 PLA2G10O15496 165 aa12.06□□□□□ -0.48
COL7A1-203ENST00000459756 ZNF207O43670 478 aaKnown RBP12.06□□□□□ -0.48
COL7A1-203ENST00000459756 VAMP1P23763 118 aa12.06□□□□□ -0.48
COL7A1-203ENST00000459756 BTCP35070 178 aa12.06□□□□□ -0.48
COL7A1-203ENST00000459756 TMEM187Q14656 261 aa12.06□□□□□ -0.48
COL7A1-203ENST00000459756 BSXQ3C1V8 233 aa12.06□□□□□ -0.48
COL7A1-203ENST00000459756 SLC25A21Q9BQT8 299 aaPredicted RBP12.06□□□□□ -0.48
COL7A1-203ENST00000459756 SMPXQ9UHP9 88 aa12.06□□□□□ -0.48
COL7A1-203ENST00000459756 FLVCR2Q9UPI3 526 aa12.06□□□□□ -0.48
COL7A1-203ENST00000459756 IGHV7-4-1A0A0J9YVY3 117 aa12.05□□□□□ -0.48
COL7A1-203ENST00000459756 ANXA3P12429 323 aa12.05□□□□□ -0.48
COL7A1-203ENST00000459756 HTR2BP41595 481 aa12.05□□□□□ -0.48
COL7A1-203ENST00000459756 SRPXP78539 464 aa12.05□□□□□ -0.48
COL7A1-203ENST00000459756 CENPSQ8N2Z9 138 aa12.05□□□□□ -0.48
COL7A1-203ENST00000459756 TMEM116Q8NCL8 245 aa12.05□□□□□ -0.48
COL7A1-203ENST00000459756 HIPK2Q9H2X6 1198 aa12.05□□□□□ -0.48
COL7A1-203ENST00000459756 HEYLQ9NQ87 328 aaPredicted RBP12.05□□□□□ -0.48
COL7A1-203ENST00000459756 TRAV14DV4A0A0A6YYC5 116 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 A0A0B4J2A0 478 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 UPK1BO75841 260 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 NDUFB6O95139 128 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 SULT1A3P0DMM9 295 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 SULT1A4P0DMN0 295 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 OPRK1P41145 380 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 SUPT4H1P63272 117 aaKnown RBP12.04□□□□□ -0.48
COL7A1-203ENST00000459756 GINS3Q9BRX5 216 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 SHPKQ9UHJ6 478 aa12.04□□□□□ -0.48
COL7A1-203ENST00000459756 OR4C46A6NHA9 309 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 CEBPZOSA8MTT3 80 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 CHEK1O14757 476 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 SCGB2A1O75556 95 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 TMEM50AO95807 157 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 TOMM20LQ6UXN7 152 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 ZNF600Q6ZNG1 722 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 LGI3Q8N145 548 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 RHPN1-AS1Q9BWJ2 59 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
COL7A1-203ENST00000459756 EDA2RQ9HAV5 297 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 TBC1D24Q9ULP9 559 aa12.03□□□□□ -0.48
COL7A1-203ENST00000459756 RPS10-NUDT3A0A1W2PQS6 291 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 CLN5O75503 358 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 LYL1P12980 280 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 ANXA7P20073 488 aaKnown RBP12.02□□□□□ -0.49
COL7A1-203ENST00000459756 BMI1P35226 326 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 IFITM3Q01628 133 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 PPP1R1AQ13522 171 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 TMEM128Q5BJH2 165 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 SLC24A4Q8NFF2 622 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 RNASEH2CQ8TDP1 164 aaKnown RBP12.02□□□□□ -0.49
COL7A1-203ENST00000459756 RNF2Q99496 336 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 FAM110AQ9BQ89 295 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 GGTLC1Q9BX51 225 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 C20orf85Q9H1P6 137 aa12.02□□□□□ -0.49
COL7A1-203ENST00000459756 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL7A1-203ENST00000459756 TRAV6A0A075B6T7 132 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 LOC102724200A0A096LPH7 203 aaPredicted RBP12.01□□□□□ -0.49
COL7A1-203ENST00000459756 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 CD5P06127 495 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 TNFRSF9Q07011 255 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 MZT2BQ6NZ67 158 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 LYZL2Q7Z4W2 148 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 NOXA1Q86UR1 476 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 ZFAND3Q9H8U3 227 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 RETNQ9HD89 108 aa12.01□□□□□ -0.49
COL7A1-203ENST00000459756 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
COL7A1-203ENST00000459756 TRAV30A0A087WSZ9 112 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 A0A1B0GU03 582 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 FAM240BA0A1B0GVZ2 78 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 DUXBA0A1W2PPF3 345 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 NXPH3O95157 252 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 SFT2D2O95562 160 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms