RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 CD300EQ496F6 205 aaPredicted RBP16.36■□□□□ 0.21
SNX27-204ENST00000458013 ZIC4Q8N9L1 334 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 A0A0G2JLM5 398 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 MYOD1P15172 320 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 C1orf162Q8NEQ5 155 aaPredicted RBP16.36■□□□□ 0.21
SNX27-204ENST00000458013 CARHSP1Q9Y2V2 147 aaKnown RBP16.36■□□□□ 0.21
SNX27-204ENST00000458013 SAMD13Q5VXD3 122 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 NEUROG1Q92886 237 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 PEMTQ9UBM1 199 aa16.36■□□□□ 0.21
SNX27-204ENST00000458013 COL5A3P25940 1745 aaPredicted RBP16.35■□□□□ 0.21
SNX27-204ENST00000458013 CKS1BP61024 79 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 PSMG4Q5JS54 123 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 IGHV1-18A0A0C4DH31 117 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 UCP1P25874 307 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 CASP8AP2Q9UKL3 1982 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 ZNF474Q6S9Z5 364 aaPredicted RBP16.35■□□□□ 0.21
SNX27-204ENST00000458013 HBDP02042 147 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 GTSCR1Q86UQ5 136 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 A0A1B0GTI1 187 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 NPIPB13A6NJU9 1138 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 NPIPB5A8MRT5 1133 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 SELLP14151 372 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 FOXF2Q12947 444 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 LINC00312Q9Y6C7 94 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 PATJQ8NI35 1801 aa16.35■□□□□ 0.21
SNX27-204ENST00000458013 RPL35AP18077 110 aaKnown RBP16.34■□□□□ 0.21
SNX27-204ENST00000458013 TIMM23O14925 209 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 EXOC3-AS1Q8N2X6 119 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 ZNF319Q9P2F9 582 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 EPDR1Q9UM22 224 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 C15orf61A6NNL5 157 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 IFI27P40305 119 aaPredicted RBP16.34■□□□□ 0.21
SNX27-204ENST00000458013 OCC1Q8TAD7 63 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 RNF125Q96EQ8 232 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 SEPSECSQ9HD40 501 aaKnown RBP16.34■□□□□ 0.21
SNX27-204ENST00000458013 PAX1P15863 534 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 TMEM155Q4W5P6 130 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 C10orf55Q5SWW7 151 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 ZNF497Q6ZNH5 498 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 NEU4Q8WWR8 484 aaPredicted RBP16.34■□□□□ 0.21
SNX27-204ENST00000458013 SBF2Q86WG5 1849 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 TRAV8-4A0A0B4J246 113 aa16.34■□□□□ 0.21
SNX27-204ENST00000458013 PARP14Q460N5 1801 aa16.33■□□□□ 0.21
SNX27-204ENST00000458013 CHD5Q8TDI0 1954 aa16.33■□□□□ 0.21
SNX27-204ENST00000458013 HOXA3O43365 443 aaPredicted RBP16.33■□□□□ 0.21
SNX27-204ENST00000458013 WBP1Q96G27 269 aa16.33■□□□□ 0.21
SNX27-204ENST00000458013 TDGF1P3P51864 188 aa16.33■□□□□ 0.21
SNX27-204ENST00000458013 IGFBP3P17936 291 aaPredicted RBP16.33■□□□□ 0.2
SNX27-204ENST00000458013 TEX29Q8N6K0 151 aa16.33■□□□□ 0.2
SNX27-204ENST00000458013 SRSF4Q08170 494 aaKnown RBP16.33■□□□□ 0.2
SNX27-204ENST00000458013 IGKV1-9A0A0C4DH69 117 aa16.33■□□□□ 0.2
SNX27-204ENST00000458013 C19orf67A6NJJ6 358 aa16.33■□□□□ 0.2
SNX27-204ENST00000458013 CIARTQ8N365 385 aaPredicted RBP16.33■□□□□ 0.2
SNX27-204ENST00000458013 IMMP1LQ96LU5 166 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 LINC00158P58513 81 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.32■□□□□ 0.2
SNX27-204ENST00000458013 NXT2Q9NPJ8 142 aaKnown RBP16.32■□□□□ 0.2
SNX27-204ENST00000458013 PSG8Q9UQ74 426 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 PSME4Q14997 1843 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 MCRIP2Q9BUT9 160 aaKnown RBP16.32■□□□□ 0.2
SNX27-204ENST00000458013 FOXG1P55316 489 aaPredicted RBP16.32■□□□□ 0.2
SNX27-204ENST00000458013 LCNL1Q6ZST4 164 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 HGFACQ04756 655 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 VMO1Q7Z5L0 202 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 LAMTOR2Q9Y2Q5 125 aa16.32■□□□□ 0.2
SNX27-204ENST00000458013 ADARB2-AS1A8MUL3 147 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 FABP5P3A8MUU1 101 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 NAPSAO96009 420 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 CRPP02741 224 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 IGKCP01834 107 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 LINC00205P59089 165 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 SRSF1Q07955 248 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNX27-204ENST00000458013 SIGLEC15Q6ZMC9 328 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 RPUSD1Q9UJJ7 312 aaKnown RBP16.31■□□□□ 0.2
SNX27-204ENST00000458013 GATD1Q8NB37 220 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 CHCHD5Q9BSY4 110 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 SLC25A15Q9Y619 301 aa16.31■□□□□ 0.2
SNX27-204ENST00000458013 TRBV6-7A0A0A0MS04 114 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 SRSF7Q16629 238 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNX27-204ENST00000458013 TMEM133Q9H2Q1 129 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 THBDP07204 575 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 OR9G4Q8NGQ1 327 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 EFNB3Q15768 340 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 BMPERQ8N8U9 685 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 KNL1Q8NG31 2342 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 TMEM30BQ3MIR4 351 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 GFI1Q99684 422 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 A8MXK9 166 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 SLC25A20O43772 301 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 DPM2O94777 84 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 CXCL1P09341 107 aa16.3■□□□□ 0.2
SNX27-204ENST00000458013 PHLDA1Q8WV24 401 aaPredicted RBP16.3■□□□□ 0.2
SNX27-204ENST00000458013 ERVK11-1P61568 191 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 VGLL1Q99990 258 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 TMEM170AQ8WVE7 144 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 TRAV3A0A0B4J244 114 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 LINC00114Q6XXX2 140 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 SCRT1Q9BWW7 348 aa16.29■□□□□ 0.2
SNX27-204ENST00000458013 H0YIZ8 118 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms