RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 HEYLQ9NQ87 328 aaPredicted RBP13.08□□□□□ -0.32
USP39-208ENST00000455732 MLXQ9UH92 298 aa13.08□□□□□ -0.32
USP39-208ENST00000455732 TMED3Q9Y3Q3 217 aa13.08□□□□□ -0.32
USP39-208ENST00000455732 U3KQK5 164 aa13.08□□□□□ -0.32
USP39-208ENST00000455732 LINC00854A0A1B0GVQ3 168 aa13.07□□□□□ -0.32
USP39-208ENST00000455732 C15orf62A8K5M9 175 aa13.07□□□□□ -0.32
USP39-208ENST00000455732 K7EMT4 169 aa13.07□□□□□ -0.32
USP39-208ENST00000455732 PITX3O75364 302 aa13.07□□□□□ -0.32
USP39-208ENST00000455732 FRMD6-AS1P0C7T7 363 aa13.07□□□□□ -0.32
USP39-208ENST00000455732 GTSCR1Q86UQ5 136 aa13.07□□□□□ -0.32
USP39-208ENST00000455732 SBSPONQ8IVN8 264 aa13.07□□□□□ -0.32
USP39-208ENST00000455732 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
USP39-208ENST00000455732 ZNF785A8K8V0 405 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 PLA2G10O15496 165 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 GNG7O60262 68 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 IGHV3-48P01763 117 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 OPRK1P41145 380 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 NOXA1Q86UR1 476 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 RNASEH2CQ8TDP1 164 aaKnown RBP13.06□□□□□ -0.32
USP39-208ENST00000455732 S100ZQ8WXG8 99 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 OR10C1Q96KK4 312 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
USP39-208ENST00000455732 TRAV25A0A0B4J276 109 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 C9orf170A2RU37 121 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 IGHV4-30-4P0DP06 118 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 BTNL8Q6UX41 500 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 TMEM61Q8N0U2 210 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 OR4X1Q8NH49 305 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 OR1S1Q8NH92 325 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 DTD1Q8TEA8 209 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 TMEM170AQ8WVE7 144 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 C19orf73Q9NVV2 129 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 PTTG2Q9NZH5 202 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 FLVCR2Q9UPI3 526 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 U3KQ87 197 aa13.05□□□□□ -0.32
USP39-208ENST00000455732 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
USP39-208ENST00000455732 LYRM1O43325 122 aa13.04□□□□□ -0.32
USP39-208ENST00000455732 NXPH3O95157 252 aa13.04□□□□□ -0.32
USP39-208ENST00000455732 NPY1RP25929 384 aa13.04□□□□□ -0.32
USP39-208ENST00000455732 ATP5IP56385 69 aaPredicted RBP13.04□□□□□ -0.32
USP39-208ENST00000455732 DHRS2Q13268 280 aa13.04□□□□□ -0.32
USP39-208ENST00000455732 WDR89Q96FK6 387 aaPredicted RBP13.04□□□□□ -0.32
USP39-208ENST00000455732 C20orf24Q9BUV8 137 aa13.04□□□□□ -0.32
USP39-208ENST00000455732 RBKSQ9H477 322 aa13.04□□□□□ -0.32
USP39-208ENST00000455732 CLN5O75503 358 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 SCGB2A1O75556 95 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 TMEM50AO95807 157 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 OR4E1P0C645 316 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 SLC25A4P12235 298 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 ZNF600Q6ZNG1 722 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 LYG2Q86SG7 212 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 MRPL36Q9P0J6 103 aaKnown RBP13.03□□□□□ -0.32
USP39-208ENST00000455732 RYR3Q15413 4870 aa13.03□□□□□ -0.32
USP39-208ENST00000455732 ANXA7P20073 488 aaKnown RBP13.02□□□□□ -0.33
USP39-208ENST00000455732 CD81P60033 236 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 GUCA2BQ16661 112 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 GGNBP1Q5YKI7 109 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 TMEM116Q8NCL8 245 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 COQ8AQ8NI60 647 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 NEURL2Q9BR09 285 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 C20orf85Q9H1P6 137 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 BATF3Q9NR55 127 aa13.02□□□□□ -0.33
USP39-208ENST00000455732 IGHV3OR16-8A0A075B7F1 116 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 IGHV7-4-1A0A0J9YVY3 117 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 YIF1AO95070 293 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 IFNA10P01566 189 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 HOXB5P09067 269 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 MLANAQ16655 118 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 ETFRF1Q6IPR1 90 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 PRSS54Q6PEW0 395 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 TOMM20LQ6UXN7 152 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 GINS3Q9BRX5 216 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 ZFAND3Q9H8U3 227 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 SMPXQ9UHP9 88 aa13.01□□□□□ -0.33
USP39-208ENST00000455732 TRAV30A0A087WSZ9 112 aa13□□□□□ -0.33
USP39-208ENST00000455732 TSPAN4O14817 238 aa13□□□□□ -0.33
USP39-208ENST00000455732 ZNF207O43670 478 aaKnown RBP13□□□□□ -0.33
USP39-208ENST00000455732 MED6O75586 246 aa13□□□□□ -0.33
USP39-208ENST00000455732 IGKV1-17P01599 117 aa13□□□□□ -0.33
USP39-208ENST00000455732 CD7P09564 240 aa13□□□□□ -0.33
USP39-208ENST00000455732 C4orf46Q504U0 113 aa13□□□□□ -0.33
USP39-208ENST00000455732 RBPMS2Q6ZRY4 209 aaKnown RBP13□□□□□ -0.33
USP39-208ENST00000455732 SLC16A13Q7RTY0 426 aa13□□□□□ -0.33
USP39-208ENST00000455732 SPAG8Q99932 426 aaPredicted RBP13□□□□□ -0.33
USP39-208ENST00000455732 WDR12Q9GZL7 423 aaKnown RBP13□□□□□ -0.33
USP39-208ENST00000455732 PUS1Q9Y606 427 aaKnown RBP eCLIP13□□□□□ -0.33
USP39-208ENST00000455732 SELENOKQ9Y6D0 94 aa13□□□□□ -0.33
USP39-208ENST00000455732 TRAV14DV4A0A0A6YYC5 116 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 CHEK1O14757 476 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 SCAF4O95104 1147 aaKnown RBP12.99□□□□□ -0.33
USP39-208ENST00000455732 TCRBP04435 133 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 IGLC1P0CG04 106 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 RND2P52198 227 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 LAMTOR1Q6IAA8 161 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 OR1S2Q8NGQ3 325 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 MITD1Q8WV92 249 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 RCHY1Q96PM5 261 aa12.99□□□□□ -0.33
USP39-208ENST00000455732 CIB3Q96Q77 187 aaPredicted RBP12.99□□□□□ -0.33
USP39-208ENST00000455732 TM2D3Q9BRN9 247 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms