RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 LINC00869P0C866 280 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 LINC00694P0DN24 101 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 HIST1H1DP16402 221 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ORM2P19652 201 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PPIBP23284 216 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 CD34P28906 385 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 AQP1P29972 269 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 BLVRBP30043 206 aaPredicted RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RPL12P30050 165 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OPRM1P35372 400 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 FAUP35544 74 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 G6PCP35575 357 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF93P35789 620 aaPredicted RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 NBL1P41271 181 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 CCR2P41597 374 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PPICP45877 212 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RPL34P49207 117 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 GZMMP51124 257 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 FABP6P51161 128 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 STC1P52823 247 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 EMP1P54849 157 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MTPNP58546 118 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RPS15AP62244 130 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 GNG5P63218 68 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 SEC11AP67812 179 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 SLC35B1P78383 322 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 CXCL6P80162 114 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ATP5G2Q06055 141 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 KIAA0040Q15053 153 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MSMO1Q15800 293 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PMCHL1Q16048 86 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 IGFBP7Q16270 282 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 C4orf26Q17RF5 130 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MPV17L2Q567V2 206 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MEIG1Q5JSS6 88 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 Q6AWC8 147 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RPL7L1Q6DKI1 246 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 SFXN4Q6P4A7 337 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF880Q6PDB4 577 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 C2orf66Q6UXQ4 117 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 SHISA6Q6ZSJ9 500 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 Q6ZUT4 128 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PPP1R27Q86WC6 154 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 APRG1Q8IVJ8 170 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 C6orf223Q8N319 242 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 TEX29Q8N6K0 151 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF615Q8N8J6 731 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 CYB561D1Q8N8Q1 229 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MDS2Q8NDY4 140 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR10G2Q8NGC3 310 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR10P1Q8NGE3 313 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR51G1Q8NGK1 321 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR4C16Q8NGL9 310 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR1L8Q8NGR8 309 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR10G6Q8NH81 332 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PPTC7Q8NI37 304 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 CHCHD10Q8WYQ3 142 aaPredicted RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 AQP3Q92482 292 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 NEIL2Q969S2 332 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 S100A16Q96FQ6 103 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 LINC00477Q96M19 166 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF488Q96MN9 340 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 AP1S3Q96PC3 154 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 LINC01587Q99440 93 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 GPER1Q99527 375 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 HSD17B10Q99714 261 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RARRES2Q99969 163 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR2H1Q9GZK4 316 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 CHST6Q9GZX3 395 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 IFI27L2Q9H2X8 130 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 POMKQ9H5K3 350 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PRORYQ9H606 182 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RERGLQ9H628 205 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 RETNQ9HD89 108 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MANBALQ9NQG1 85 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PRTFDC1Q9NRG1 225 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 CISHQ9NSE2 258 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 OR5V1Q9UGF6 321 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PRNDQ9UKY0 176 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 WASHC3Q9Y3C0 194 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 MED31Q9Y3C7 131 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 FIS1Q9Y3D6 152 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 LSM5Q9Y4Y9 91 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 NEUROG3Q9Y4Z2 214 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 INSIG2Q9Y5U4 225 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 SOX21Q9Y651 276 aaPredicted RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PDCD11Q14690 1871 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 NUP210LQ5VU65 1888 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF106Q9H2Y7 1883 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PARP14Q460N5 1801 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 UBR1Q8IWV7 1749 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 PEAK1Q9H792 1746 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 TET3O43151 1660 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 ADAMTSL3P82987 1691 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 BAZ2BQ9UIF8 2168 aaKnown RBP1.51□□□□□ -2.17
LINC02540-201ENST00000455554 LRP6O75581 1613 aa1.51□□□□□ -2.17
LINC02540-201ENST00000455554 DOCK3Q8IZD9 2030 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 NCKAP5O14513 1909 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 TNS2Q63HR2 1409 aa1.5□□□□□ -2.17
LINC02540-201ENST00000455554 GBF1Q92538 1859 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms