RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 A0A0G2JLM5 398 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 MFSD2BA6NFX1 497 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 HAX1O00165 279 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 ATP5G2Q06055 141 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 OR2F1Q13607 317 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 KRTAP21-3Q3LHN1 58 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 AWAT1Q58HT5 328 aa12.88□□□□□ -0.35
CCDC90B-202ENST00000455220 IGHV3-21A0A0B4J1V1 117 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 FCGR2BP31994 310 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 ZNF491Q8N8L2 437 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 TMEM116Q8NCL8 245 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 OR1S2Q8NGQ3 325 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 OR5C1Q8NGR4 320 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 ZNF502Q8TBZ5 544 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 WFDC12Q8WWY7 111 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 UBE2E2Q96LR5 201 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 C19orf24Q9BVV8 132 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 ZC4H2Q9NQZ6 224 aa12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-202ENST00000455220 CXCL2P19875 107 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 GAMTQ14353 236 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 ATP6V1FQ16864 119 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 VWC2Q2TAL6 325 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 KCNRGQ8N5I3 272 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 ATP6V0BQ99437 205 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 C21orf62Q9NYP8 219 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 TRBV7-1A0A0A6YYK4 115 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 F8W735 103 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 CD28P10747 220 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 EIF2B2P49770 351 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 KRTAP10-3P60369 221 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 LILRB2Q8N423 598 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 OR4X1Q8NH49 305 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 SLC35E1Q96K37 410 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 FBXL17Q9UF56 701 aa12.86□□□□□ -0.35
CCDC90B-202ENST00000455220 A0A0D9SG52 128 aa12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 CDX1P47902 265 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 AP2S1P53680 142 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 MFAP4P55083 255 aa12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 ZNF343Q6P1L6 599 aa12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 PPP1R14BQ96C90 147 aa12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 TXN2Q99757 166 aa12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 TMEM147Q9BVK8 224 aa12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 S4R3C0 116 aa12.85□□□□□ -0.35
CCDC90B-202ENST00000455220 BOLA2-SMG1P6H3BVE0 249 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 RND2P52198 227 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 CLINT1Q14677 625 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 LGALSLQ3ZCW2 172 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 ACSM6Q6P461 480 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 C9orf62Q8N4C0 152 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 ATP5SQ99766 215 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 GNB4Q9HAV0 340 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 UQCC1Q9NVA1 299 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 TENM1Q9UKZ4 2725 aa12.84□□□□□ -0.35
CCDC90B-202ENST00000455220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 CLN5O75503 358 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 DFFBO76075 338 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 IGHV3-11P01762 117 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 IGHV3-23P01764 117 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 NPBWR1P48145 328 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 NKX2-5P52952 324 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 FAM209BQ5JX69 171 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 LAMTOR1Q6IAA8 161 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 TREML4Q6UXN2 200 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 TMEM144Q7Z5S9 345 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 C11orf44Q8N8P7 122 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 NPIPB3Q92617 1050 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 ACY3Q96HD9 319 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 CITED2Q99967 270 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 SMIM3Q9BZL3 60 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 WFDC1Q9HC57 220 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 NPVFQ9HCQ7 196 aa12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-202ENST00000455220 TCRBV4S1A1TA0A5B7 111 aa12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 TAAR5O14804 337 aa12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 RUNX1Q01196 453 aa12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 THAP8Q8NA92 274 aa12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 GAR1Q9NY12 217 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 WDR83OSQ9Y284 106 aa12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 LSM4Q9Y4Z0 139 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 COL6A5A8TX70 2615 aa12.82□□□□□ -0.36
CCDC90B-202ENST00000455220 IGKV1OR2-108A0A075B7D4 117 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 SMCO3A2RU48 225 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 I3L521 148 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 IGLC1P0CG04 106 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 AKR1C1Q04828 323 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 Q56UQ5 140 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 TMUB2Q71RG4 321 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 C4orf3Q8WVX3 66 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 CITED1Q99966 193 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 PARD6GQ9BYG4 376 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 ARL6Q9H0F7 186 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 IGKV1D-37A0A075B6S9 117 aa12.81□□□□□ -0.36
CCDC90B-202ENST00000455220 UBE2L5PA0A1B0GUS4 154 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms