RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 EXTL2Q9UBQ6 330 aa11.68□□□□□ -0.54
GPC1-206ENST00000455111 K7EQG2 157 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 PGAM2P15259 253 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 C4BPBP20851 252 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 RORCP51449 518 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 RNASE10Q5GAN6 216 aaKnown RBP11.67□□□□□ -0.54
GPC1-206ENST00000455111 ARRDC1Q8N5I2 433 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 Q8NAQ8 132 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 DUSP18Q8NEJ0 188 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 MARCH1Q8TCQ1 289 aa11.67□□□□□ -0.54
GPC1-206ENST00000455111 RTBDNQ9BSG5 229 aaPredicted RBP11.67□□□□□ -0.54
GPC1-206ENST00000455111 FAM25AB3EWG3 89 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 FAM25CB3EWG5 89 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 FAM25GB3EWG6 89 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 CLN5O75503 358 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
GPC1-206ENST00000455111 RBMY1A1P0DJD3 496 aaKnown RBP11.66□□□□□ -0.54
GPC1-206ENST00000455111 RBMY1CP0DJD4 496 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 NPBWR1P48145 328 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 RBMY1FQ15415 496 aaKnown RBP11.66□□□□□ -0.54
GPC1-206ENST00000455111 RBMS2Q15434 407 aaKnown RBP11.66□□□□□ -0.54
GPC1-206ENST00000455111 TIGITQ495A1 244 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 LGALS9CQ6DKI2 356 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 TRPT1Q86TN4 253 aaKnown RBP11.66□□□□□ -0.54
GPC1-206ENST00000455111 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 DCANP1Q8TF63 244 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 VCX3AQ9NNX9 186 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 U3KQE9 123 aa11.66□□□□□ -0.54
GPC1-206ENST00000455111 TRAV2A0A0B4J234 112 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 NXPH3O95157 252 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 CRYBB3P26998 211 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 S100GP29377 79 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 AKR1C2P52895 323 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 TMEM229BQ8NBD8 167 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 OR4X1Q8NH49 305 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 TERB2Q8NHR7 220 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 GLYATL2Q8WU03 294 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 GINS3Q9BRX5 216 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 KLK5Q9Y337 293 aaPredicted RBP11.65□□□□□ -0.54
GPC1-206ENST00000455111 X6R8D5 127 aa11.65□□□□□ -0.54
GPC1-206ENST00000455111 KNCNA6PVL3 124 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 CDS2O95674 445 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 IFNA17P01571 189 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 OR5AC1P0C628 307 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 ZNF182P17025 639 aaPredicted RBP11.64□□□□□ -0.55
GPC1-206ENST00000455111 SNCAP37840 140 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
GPC1-206ENST00000455111 C11orf45Q8TAV5 145 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 GPR146Q96CH1 333 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 FBXL17Q9UF56 701 aa11.64□□□□□ -0.55
GPC1-206ENST00000455111 CTDSP2O14595 271 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 IGLC1P0CG04 106 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 RPL5P46777 297 aaKnown RBP11.63□□□□□ -0.55
GPC1-206ENST00000455111 P2RY1P47900 373 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 HOXA1P49639 335 aaPredicted RBP11.63□□□□□ -0.55
GPC1-206ENST00000455111 MEF2DQ14814 521 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 SPCS2Q15005 226 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 PRSS54Q6PEW0 395 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 SELENOHQ8IZQ5 122 aaKnown RBP11.63□□□□□ -0.55
GPC1-206ENST00000455111 TMEM217Q8N7C4 229 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 CSNK1G2-AS1Q8NCQ2 148 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 C6orf62Q9GZU0 229 aaPredicted RBP11.63□□□□□ -0.55
GPC1-206ENST00000455111 TMEM222Q9H0R3 208 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 PRR13Q9NZ81 148 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 APLNQ9ULZ1 77 aa11.63□□□□□ -0.55
GPC1-206ENST00000455111 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
GPC1-206ENST00000455111 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
GPC1-206ENST00000455111 RAB3DO95716 219 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 ZNF688P0C7X2 276 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 TBPP20226 339 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 NPPCP23582 126 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 OPRK1P41145 380 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 TMEM187Q14656 261 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 SCGB2B2Q4G0G5 96 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 GPR107Q5VW38 600 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 STEAP1BQ6NZ63 245 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 GLMPQ8WWB7 406 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 TMEM230Q96A57 120 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 COPZ2Q9P299 210 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 RABAC1Q9UI14 185 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 PCLOQ9Y6V0 5065 aa11.62□□□□□ -0.55
GPC1-206ENST00000455111 IGHV4-28A0A0C4DH34 117 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 DNASE2O00115 360 aaPredicted RBP11.61□□□□□ -0.55
GPC1-206ENST00000455111 CORTO00230 105 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 TAS2R19P59542 299 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 PAFAH1B2P68402 229 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 USF2Q15853 346 aaPredicted RBP11.61□□□□□ -0.55
GPC1-206ENST00000455111 MZT2AQ6P582 158 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 GSG1LQ6UXU4 331 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 OR52E5Q8NH55 327 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 NAA60Q9H7X0 242 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 CLEC5AQ9NY25 188 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 GPR132Q9UNW8 380 aa11.61□□□□□ -0.55
GPC1-206ENST00000455111 TEX13DA0A0J9YY54 714 aaPredicted RBP11.6□□□□□ -0.55
GPC1-206ENST00000455111 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
GPC1-206ENST00000455111 GABARAPH6UMI1 98 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 CD5P06127 495 aa11.6□□□□□ -0.55
GPC1-206ENST00000455111 ALDH3B2P48448 385 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms