RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 TRBV7-1A0A0A6YYK4 115 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 F8W735 103 aaPredicted RBP8.73□□□□□ -1.01
TRAF4-206ENST00000454852 RPLP1P05386 114 aaKnown RBP8.73□□□□□ -1.01
TRAF4-206ENST00000454852 OPRK1P41145 380 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 TPPP2P59282 170 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 RUNX1Q01196 453 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 NHLH2Q02577 135 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 ATP5G2Q06055 141 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 ZNF343Q6P1L6 599 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 OR4X1Q8NH49 305 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 ZNF502Q8TBZ5 544 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 MISP3Q96FF7 219 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 MS4A10Q96PG2 267 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 C19orf24Q9BVV8 132 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
TRAF4-206ENST00000454852 ATRQ13535 2644 aa8.73□□□□□ -1.01
TRAF4-206ENST00000454852 A0A0D9SG52 128 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 MFSD2BA6NFX1 497 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 ARPC5O15511 151 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 CST7O76096 145 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 SLC38A11Q08AI6 406 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 GAMTQ14353 236 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 OR8G2PQ6IF36 304 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 KCNRGQ8N5I3 272 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 OR1S2Q8NGQ3 325 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 OR5C1Q8NGR4 320 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 EEF1AKMT3Q96AZ1 226 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 MFFQ9GZY8 342 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 C21orf62Q9NYP8 219 aa8.72□□□□□ -1.01
TRAF4-206ENST00000454852 LSM4Q9Y4Z0 139 aaKnown RBP8.72□□□□□ -1.01
TRAF4-206ENST00000454852 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.71□□□□□ -1.02
TRAF4-206ENST00000454852 TAAR5O14804 337 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 CLN5O75503 358 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 DFFBO76075 338 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 LGALS1P09382 135 aaKnown RBP8.71□□□□□ -1.02
TRAF4-206ENST00000454852 CD28P10747 220 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 CXCL2P19875 107 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 NPBWR1P48145 328 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 MFAP4P55083 255 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 RIPPLY3P57055 190 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 KRTAP10-3P60369 221 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 MLANAQ16655 118 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 TMEM144Q7Z5S9 345 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 TMEM217Q8N7C4 229 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 THAP8Q8NA92 274 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 BSCL2Q96G97 398 aaPredicted RBP8.71□□□□□ -1.02
TRAF4-206ENST00000454852 SLC35E1Q96K37 410 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 CITED1Q99966 193 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 TMEM147Q9BVK8 224 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 PARD6GQ9BYG4 376 aaPredicted RBP8.71□□□□□ -1.02
TRAF4-206ENST00000454852 NPVFQ9HCQ7 196 aa8.71□□□□□ -1.02
TRAF4-206ENST00000454852 MRPL36Q9P0J6 103 aaKnown RBP8.71□□□□□ -1.02
TRAF4-206ENST00000454852 PAIP2BQ9ULR5 123 aaKnown RBP8.71□□□□□ -1.02
TRAF4-206ENST00000454852 TSSC4Q9Y5U2 329 aaPredicted RBP8.71□□□□□ -1.02
TRAF4-206ENST00000454852 TRAV30A0A087WSZ9 112 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 I3L521 148 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 HAX1O00165 279 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 LGALSLQ3ZCW2 172 aaPredicted RBP8.7□□□□□ -1.02
TRAF4-206ENST00000454852 SPSB3Q6PJ21 355 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 TREML4Q6UXN2 200 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 LCNL1Q6ZST4 164 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 C9orf62Q8N4C0 152 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 C4orf3Q8WVX3 66 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 ATP5SQ99766 215 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 CITED2Q99967 270 aaPredicted RBP8.7□□□□□ -1.02
TRAF4-206ENST00000454852 UQCC1Q9NVA1 299 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 FBXL17Q9UF56 701 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 WDR83OSQ9Y284 106 aa8.7□□□□□ -1.02
TRAF4-206ENST00000454852 IGKV1D-37A0A075B6S9 117 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 TCRBV4S1A1TA0A5B7 111 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 MPDU1O75352 247 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 CTSGP08311 255 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 IGLC1P0CG04 106 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 RND2P52198 227 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 NKX2-5P52952 324 aaPredicted RBP8.69□□□□□ -1.02
TRAF4-206ENST00000454852 ZNF266Q14584 549 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 LAMTOR1Q6IAA8 161 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 ACSM6Q6P461 480 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 NDUFA11Q86Y39 141 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 LILRB2Q8N423 598 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 NPIPB3Q92617 1050 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 ZNF747Q9BV97 191 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 GNB4Q9HAV0 340 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 ZC4H2Q9NQZ6 224 aa8.69□□□□□ -1.02
TRAF4-206ENST00000454852 IGKV1OR2-108A0A075B7D4 117 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 TGOLN2O43493 480 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 BCL2L11O43521 198 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 SCGB2A1O75556 95 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 IGKV1-17P01599 117 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 CLEC3BP05452 202 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 ADMP35318 185 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 AP2S1P53680 142 aaPredicted RBP8.68□□□□□ -1.02
TRAF4-206ENST00000454852 YPEL3P61236 119 aaPredicted RBP8.68□□□□□ -1.02
TRAF4-206ENST00000454852 DEFA5Q01523 94 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 KRTAP21-3Q3LHN1 58 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 TEPPQ6URK8 271 aa8.68□□□□□ -1.02
TRAF4-206ENST00000454852 TMUB2Q71RG4 321 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms