RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 LEUTXA8MZ59 168 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 SRRM5B3KS81 715 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 NDUFB3O43676 98 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGLV3-25P01717 112 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV1-8P0DP01 117 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 HIST1H1DP16402 221 aaKnown RBP3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 PSMB8P28062 276 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF93P35789 620 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 KRTAP10-9P60411 292 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 HBBP68871 147 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 PLGLB1Q02325 96 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF767PQ75MW2 155 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 GKN2Q86XP6 184 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 Q8N7P7 452 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 KLHL30-AS1Q8NEE0 82 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 ITLN2Q8WWU7 325 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 TMEM158Q8WZ71 300 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 CIB3Q96Q77 187 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 CHCHD7Q9BUK0 85 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 PHLDA3Q9Y5J5 127 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 V9GYS6 101 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 SYNJ1O43426 1573 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 CEP170Q5SW79 1584 aa3.12□□□□□ -1.91
HMGB3P21-201ENST00000452483 LOXHD1Q8IVV2 1947 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A087X0T9 212 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV3-43A0A0B4J1X8 118 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 OR2T8A6NH00 312 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 UBFD1O14562 309 aaKnown RBP3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 CDC42EP2O14613 210 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 ARPP19P56211 112 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 LINC01554Q52M75 96 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF678Q5SXM1 525 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 BPIFA4PQ86YQ2 179 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 C14orf178Q8N769 122 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 SUMF2Q8NBJ7 301 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 OR10AC1Q8NH08 325 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 YPEL2Q96QA6 119 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 SDF2Q99470 211 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 B9D2Q9BPU9 175 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 MIEN1Q9BRT3 115 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 MRPL32Q9BYC8 188 aaKnown RBP3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 TMEM133Q9H2Q1 129 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 METTL1Q9UBP6 276 aaKnown RBP3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 SNX12Q9UMY4 172 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 DOCK4Q8N1I0 1966 aa3.11□□□□□ -1.91
HMGB3P21-201ENST00000452483 TNS2Q63HR2 1409 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 CCDC18Q5T9S5 1454 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 AKAP12Q02952 1782 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 ATG2BQ96BY7 2078 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV3-21A0A0B4J1V1 117 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A0D9SEW6 157 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 PNMA8CA0A1B0GUJ8 204 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A1B0GVX0 72 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 FNDC10F2Z333 226 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 CCDC179H3BU77 68 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 BPY2O14599 106 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 KRASP01116 189 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 TCRAP04437 139 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 CD28P10747 220 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 CRHBPP24387 322 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 CRYBB3P26998 211 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 TGFBR1P36897 503 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 RPL27AP46776 148 aaKnown RBP3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 DYNLT3P51808 116 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 CRISP3P54108 245 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 LYZP61626 148 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 DIAPH2-AS1Q14236 149 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 FAM104BQ5XKR9 115 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 C22orf39Q6P5X5 142 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF880Q6PDB4 577 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 RPS19BP1Q86WX3 136 aaKnown RBP3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF101Q8IZC7 436 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 CD177Q8N6Q3 437 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZFP62Q8NB50 900 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 WFDC5Q8TCV5 224 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 C16orf74Q96GX8 76 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 LITAFQ99732 161 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 GINS4Q9BRT9 223 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 SPANXDQ9BXN6 97 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 DEFB126Q9BYW3 111 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 DUSP21Q9H596 190 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 C21orf62Q9NYP8 219 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 KLK5Q9Y337 293 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 PCM1Q15154 2024 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 TET2Q6N021 2002 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 NOTCH4Q99466 2003 aa3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.1□□□□□ -1.91
HMGB3P21-201ENST00000452483 KIAA1671Q9BY89 1806 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 PZPP20742 1482 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 DICER1Q9UPY3 1922 aaKnown RBP3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 TRBV27A0A0K0K1C4 114 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 A0A1W2PP18 115 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 ZNF727A8MUV8 499 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 LEPROTO15243 131 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 HIST1H2BKO60814 126 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGLV2-11P01706 119 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 IGHV4-34P06331 123 aa3.09□□□□□ -1.91
HMGB3P21-201ENST00000452483 HIST1H2BJP06899 126 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms