RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 C9orf66Q5T8R8 295 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 TMEM268Q5VZI3 342 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 SLC25A24Q6NUK1 477 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 LGI3Q8N145 548 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 OR10W1Q8NGF6 305 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 FANCD2OSQ96PS1 177 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 SEC11CQ9BY50 192 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 KLK9Q9UKQ9 250 aa6.86□□□□□ -1.31
COL8A1-203ENST00000452013 CARHSP1Q9Y2V2 147 aaKnown RBP6.86□□□□□ -1.31
COL8A1-203ENST00000452013 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 TMEM218A2RU14 115 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 E5RGE8 158 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 CCSO14618 274 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 OVOL1O14753 267 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 NDUFB8O95169 186 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 SNAPINO95295 136 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 P0C879 139 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 INSL3P51460 131 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 SUB1P53999 127 aaKnown RBP eCLIP6.85□□□□□ -1.31
COL8A1-203ENST00000452013 SUPT4H1P63272 117 aaKnown RBP6.85□□□□□ -1.31
COL8A1-203ENST00000452013 PRCDQ00LT1 54 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 DEFA6Q01524 100 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 C15orf32Q32M92 178 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 LRRC37A5PQ49AS3 106 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 DLX4Q92988 240 aaPredicted RBP6.85□□□□□ -1.31
COL8A1-203ENST00000452013 EEF1AKMT3Q96AZ1 226 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 GPR146Q96CH1 333 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 SMIM8Q96KF7 97 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 ELOVL1Q9BW60 279 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 SMDT1Q9H4I9 107 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 PLEKHA3Q9HB20 300 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 ENY2Q9NPA8 101 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 TMED3Q9Y3Q3 217 aa6.85□□□□□ -1.31
COL8A1-203ENST00000452013 F11RQ9Y624 299 aaKnown RBP6.85□□□□□ -1.31
COL8A1-203ENST00000452013 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.84□□□□□ -1.31
COL8A1-203ENST00000452013 TRBV7-1A0A0A6YYK4 115 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 BORCS7-ASMTA0A0B4J1R7 106 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 SEC14L6B5MCN3 397 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 INS-IGF2F8WCM5 200 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 K7EPK0 472 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 ST8SIA3O43173 380 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 DEDDO75618 318 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 APOC3P02656 99 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 H2AFB1P0C5Y9 115 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 HOXD3P31249 432 aaPredicted RBP6.84□□□□□ -1.31
COL8A1-203ENST00000452013 SNCAP37840 140 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 SULT1A2P50226 295 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 SLURP1P55000 103 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 SPCS3P61009 180 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 FLI1Q01543 452 aaPredicted RBP6.84□□□□□ -1.31
COL8A1-203ENST00000452013 BTN1A1Q13410 526 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 IZUMO4Q1ZYL8 232 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 RPEL1Q2QD12 228 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 BEAN1Q3B7T3 259 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 KPRPQ5T749 579 aaPredicted RBP6.84□□□□□ -1.31
COL8A1-203ENST00000452013 C1QL4Q86Z23 238 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 OR2C3Q8N628 320 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 SLC35G3Q8N808 338 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 UBAC2Q8NBM4 344 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 OR1P1Q8NH06 330 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 OR52E5Q8NH55 327 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 VN1R17PQ8TDU5 208 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 PCNPQ8WW12 178 aaKnown RBP6.84□□□□□ -1.31
COL8A1-203ENST00000452013 OR4C12Q96R67 309 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 NKX6-2Q9C056 277 aaPredicted RBP6.84□□□□□ -1.31
COL8A1-203ENST00000452013 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.31
COL8A1-203ENST00000452013 A0A1B0GU03 582 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 TSPAN4O14817 238 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 GGCTO75223 188 aaKnown RBP6.83□□□□□ -1.32
COL8A1-203ENST00000452013 CLEC3BP05452 202 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 SEC11BP0C7V7 166 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 RPL12P30050 165 aaKnown RBP6.83□□□□□ -1.32
COL8A1-203ENST00000452013 P2RY1P47900 373 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 CAV2P51636 162 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 KLF5Q13887 457 aaPredicted RBP6.83□□□□□ -1.32
COL8A1-203ENST00000452013 IAH1Q2TAA2 248 aaPredicted RBP6.83□□□□□ -1.32
COL8A1-203ENST00000452013 ANKRD55Q3KP44 614 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 CLEC19AQ6UXS0 136 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 Q6ZRM9 215 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 C19orf35Q6ZS72 473 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 REC114Q7Z4M0 266 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 LYZL2Q7Z4W2 148 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 BPIFCQ8NFQ6 507 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 ATP6V0BQ99437 205 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 ARV1Q9H2C2 271 aa6.83□□□□□ -1.32
COL8A1-203ENST00000452013 STRAPQ9Y3F4 350 aaKnown RBP6.83□□□□□ -1.32
COL8A1-203ENST00000452013 TET2Q6N021 2002 aaPredicted RBP6.83□□□□□ -1.32
COL8A1-203ENST00000452013 A0A0G2JRQ6 117 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 CEBPZOSA8MTT3 80 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 ZNF705EA8MWA4 302 aaPredicted RBP6.82□□□□□ -1.32
COL8A1-203ENST00000452013 H0YIZ8 118 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 SCO1O75880 301 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 ATF4P18848 351 aaPredicted RBP6.82□□□□□ -1.32
COL8A1-203ENST00000452013 PVALBP20472 110 aaPredicted RBP6.82□□□□□ -1.32
COL8A1-203ENST00000452013 HOXA1P49639 335 aaPredicted RBP6.82□□□□□ -1.32
COL8A1-203ENST00000452013 DEFA5Q01523 94 aa6.82□□□□□ -1.32
COL8A1-203ENST00000452013 RAB32Q13637 225 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms