RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TSC22D2O75157 780 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 SCAF4O95104 1147 aaKnown RBP16.59■□□□□ 0.25
C9orf3-208ENST00000451893 AP2S1P53680 142 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-208ENST00000451893 SYNJ2BPP57105 145 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 SSBP2P81877 361 aaPredicted RBP16.59■□□□□ 0.25
C9orf3-208ENST00000451893 SSX9Q7RTT3 188 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 ARPC5LQ9BPX5 153 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 MAGT1Q9H0U3 335 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 TMEM14BQ9NUH8 114 aa16.59■□□□□ 0.25
C9orf3-208ENST00000451893 C15orf61A6NNL5 157 aa16.58■□□□□ 0.24
C9orf3-208ENST00000451893 RGS13O14921 159 aa16.58■□□□□ 0.24
C9orf3-208ENST00000451893 HSPE1P61604 102 aaKnown RBP16.58■□□□□ 0.24
C9orf3-208ENST00000451893 EIF5AP63241 154 aaKnown RBP16.58■□□□□ 0.24
C9orf3-208ENST00000451893 BAXQ07812 192 aa16.58■□□□□ 0.24
C9orf3-208ENST00000451893 OR9G4Q8NGQ1 327 aa16.58■□□□□ 0.24
C9orf3-208ENST00000451893 ZNF430Q9H8G1 570 aaPredicted RBP16.58■□□□□ 0.24
C9orf3-208ENST00000451893 KBTBD11O94819 623 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 FRMD6-AS1P0C7T7 363 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 RPP30P78346 268 aaKnown RBP16.57■□□□□ 0.24
C9orf3-208ENST00000451893 RHOGP84095 191 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 ATP5G2Q06055 141 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 ZNF767PQ75MW2 155 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 VKORC1L1Q8N0U8 176 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 TMEM167AQ8TBQ9 72 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 RBKSQ9H477 322 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 PEMTQ9UBM1 199 aa16.57■□□□□ 0.24
C9orf3-208ENST00000451893 FAM223BA6NKX1 122 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 IFNA17P01571 189 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 CAV2P51636 162 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 PAX9P55771 341 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 IFITM2Q01629 132 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 EXOSC2Q13868 293 aaKnown RBP16.56■□□□□ 0.24
C9orf3-208ENST00000451893 ZNF343Q6P1L6 599 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 FAM223AQ8IWN6 122 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 TMEM252Q8N6L7 170 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 OR5B3Q8NH48 314 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 QTRT1Q9BXR0 403 aaKnown RBP16.56■□□□□ 0.24
C9orf3-208ENST00000451893 PSENENQ9NZ42 101 aa16.56■□□□□ 0.24
C9orf3-208ENST00000451893 CEBPZOSA8MTT3 80 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 BRI3O95415 125 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 PRH1P02810 166 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 ATP5IP56385 69 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-208ENST00000451893 KLF5Q13887 457 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-208ENST00000451893 GTSCR1Q86UQ5 136 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 STX12Q86Y82 276 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 SBSPONQ8IVN8 264 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 DTD1Q8TEA8 209 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 RCHY1Q96PM5 261 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 HIPK2Q9H2X6 1198 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 TNCP24821 2201 aa16.55■□□□□ 0.24
C9orf3-208ENST00000451893 TMEM50AO95807 157 aa16.54■□□□□ 0.24
C9orf3-208ENST00000451893 IFNA7P01567 189 aa16.54■□□□□ 0.24
C9orf3-208ENST00000451893 IGLV1-51P01701 117 aa16.54■□□□□ 0.24
C9orf3-208ENST00000451893 MAS1LP35410 378 aa16.54■□□□□ 0.24
C9orf3-208ENST00000451893 RPL8P62917 257 aaKnown RBP16.54■□□□□ 0.24
C9orf3-208ENST00000451893 TEX261Q6UWH6 196 aa16.54■□□□□ 0.24
C9orf3-208ENST00000451893 OR51B2Q9Y5P1 312 aa16.54■□□□□ 0.24
C9orf3-208ENST00000451893 U3KQ87 197 aa16.54■□□□□ 0.24
C9orf3-208ENST00000451893 TRAV3A0A0B4J244 114 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 FAM24AA6NFZ4 105 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 JTBO76095 146 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 RPL27AP46776 148 aaKnown RBP16.53■□□□□ 0.24
C9orf3-208ENST00000451893 SULT1A1P50225 295 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 EWSR1Q01844 656 aaKnown RBP eCLIP16.53■□□□□ 0.24
C9orf3-208ENST00000451893 C10orf55Q5SWW7 151 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 LCN12Q6JVE5 192 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 STOML3Q8TAV4 291 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 ENY2Q9NPA8 101 aa16.53■□□□□ 0.24
C9orf3-208ENST00000451893 INS-IGF2F8WCM5 200 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 OR2J3O76001 311 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 NXPH3O95157 252 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 TRBV12-3P01733 135 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 OR2B8PP59922 312 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 FAM209BQ5JX69 171 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 NECAP1Q8NC96 275 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 OR1L8Q8NGR8 309 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 DYNLRB2Q8TF09 96 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 PHYHIPLQ96FC7 376 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 ZNF471Q9BX82 626 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-208ENST00000451893 COMMD5Q9GZQ3 224 aa16.52■□□□□ 0.24
C9orf3-208ENST00000451893 STRAPQ9Y3F4 350 aaKnown RBP16.52■□□□□ 0.24
C9orf3-208ENST00000451893 BORCS7-ASMTA0A0B4J1R7 106 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 IGHV4-30-4P0DP06 118 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 IAPPP10997 89 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 DEFA4P12838 97 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 TPT1P13693 172 aaKnown RBP16.51■□□□□ 0.23
C9orf3-208ENST00000451893 HBG1P69891 147 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 HBG2P69892 147 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 PRCDQ00LT1 54 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 MRGPRG-AS1Q2M3A8 158 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 TMEM14EPQ6UXP3 125 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 TTC9CQ8N5M4 171 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 ZNF680Q8NEM1 530 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 TUBA4BQ9H853 241 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 DNAH9Q9NYC9 4486 aa16.51■□□□□ 0.23
C9orf3-208ENST00000451893 TEX50A0A1B0GTY4 177 aa16.5■□□□□ 0.23
C9orf3-208ENST00000451893 IGSF23A1L1A6 192 aa16.5■□□□□ 0.23
C9orf3-208ENST00000451893 C3orf84H3BNL1 204 aa16.5■□□□□ 0.23
C9orf3-208ENST00000451893 C15orf32Q32M92 178 aa16.5■□□□□ 0.23
C9orf3-208ENST00000451893 EIF5AL1Q6IS14 154 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms