RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SS18L2Q9UHA2 77 aa7.07□□□□□ -1.28
LSM5-208ENST00000450169 TIMM8BQ9Y5J9 83 aaPredicted RBP7.07□□□□□ -1.28
LSM5-208ENST00000450169 KBTBD11-OT1A0A1B0GTJ5 212 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 SIVA1O15304 175 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 SMIM13P0DJ93 91 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 MYF5P13349 255 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 CD24P25063 80 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 TEPPQ6URK8 271 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 TMEM116Q8NCL8 245 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 OR10D3Q8NH80 312 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 ZNF418Q8TF45 676 aaPredicted RBP7.06□□□□□ -1.28
LSM5-208ENST00000450169 C19orf24Q9BVV8 132 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 HEYLQ9NQ87 328 aaPredicted RBP7.06□□□□□ -1.28
LSM5-208ENST00000450169 AP5S1Q9NUS5 200 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 JPT1Q9UK76 154 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 SEC16AO15027 2179 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 CEBPDP49716 269 aaPredicted RBP7.06□□□□□ -1.28
LSM5-208ENST00000450169 ATP5G2Q06055 141 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 EIF4EBP1Q13541 118 aaPredicted RBP7.06□□□□□ -1.28
LSM5-208ENST00000450169 WFDC2Q14508 124 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 COLCA1Q6ZS62 124 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 ANKRD37Q7Z713 158 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 TAAR6Q96RI8 345 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 FGF21Q9NSA1 209 aa7.06□□□□□ -1.28
LSM5-208ENST00000450169 TNRC6AQ8NDV7 1962 aaKnown RBP7.05□□□□□ -1.28
LSM5-208ENST00000450169 SLC25A17O43808 307 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 KIR2DL1P43626 348 aaPredicted RBP7.05□□□□□ -1.28
LSM5-208ENST00000450169 ZNF138P52744 262 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 NRN1LQ496H8 165 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 TMEM196Q5HYL7 178 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 ZNF497Q6ZNH5 498 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 GCSAMQ8N6F7 178 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 WDR31Q8NA23 367 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 CDX2Q99626 313 aaPredicted RBP7.05□□□□□ -1.28
LSM5-208ENST00000450169 RPP25Q9BUL9 199 aaKnown RBP7.05□□□□□ -1.28
LSM5-208ENST00000450169 PSG8Q9UQ74 426 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 SPEGQ15772 3267 aa7.05□□□□□ -1.28
LSM5-208ENST00000450169 TEX50A0A1B0GTY4 177 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 C2CD4DB7Z1M9 353 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 NCR2O95944 276 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 GATA3P23771 443 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 TAS2R45P59539 299 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 ETDBQ3ZM63 59 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 LINC00696Q6ZRV3 163 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 ZNF503Q96F45 646 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 LINC00479Q96M42 142 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 ZNF747Q9BV97 191 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 SIGLEC8Q9NYZ4 499 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 INSIG2Q9Y5U4 225 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 NCKAP5O14513 1909 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 SPINK2P20155 84 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 VDAC2P45880 294 aaPredicted RBP7.04□□□□□ -1.28
LSM5-208ENST00000450169 PCBD1P61457 104 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 TFF2Q03403 129 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 C1orf122Q6ZSJ8 110 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 SH2D6Q7Z4S9 175 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 ABHD12Q8N2K0 398 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 GTSF1Q8WW33 167 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 ARPC1AQ92747 370 aa7.04□□□□□ -1.28
LSM5-208ENST00000450169 SPACA9Q96E40 222 aaPredicted RBP7.04□□□□□ -1.28
LSM5-208ENST00000450169 HSD17B10Q99714 261 aaKnown RBP7.04□□□□□ -1.28
LSM5-208ENST00000450169 MBNL3Q9NUK0 354 aaKnown RBP7.04□□□□□ -1.28
LSM5-208ENST00000450169 A0A1W2PQF6 199 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 A0A1W2PRD5 423 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 A0A1W2PRF3 423 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 A0A1W2PRM7 423 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 C5orf49A4QMS7 147 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 CRYGCP07315 174 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 FOXB1Q99853 325 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 NDFIP1Q9BT67 221 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 MPC1Q9Y5U8 109 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 LAMA1P25391 3075 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.03□□□□□ -1.28
LSM5-208ENST00000450169 A8MWL6 223 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 MGST3O14880 152 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 SPINK8P0C7L1 97 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 GPR12P47775 334 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 CYB561P49447 251 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 TCTAP57738 103 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 ESPL1Q14674 2120 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.03□□□□□ -1.28
LSM5-208ENST00000450169 Q6P435 159 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 INO80CQ6PI98 192 aaPredicted RBP7.03□□□□□ -1.28
LSM5-208ENST00000450169 PPP1R32Q7Z5V6 425 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 ZADH2Q8N4Q0 377 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 TTC9CQ8N5M4 171 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 FADS6Q8N9I5 356 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 NFAM1Q8NET5 270 aaPredicted RBP7.03□□□□□ -1.28
LSM5-208ENST00000450169 RNF183Q96D59 192 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 C18orf15Q96N68 181 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 GPR82Q96P67 336 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 NABP2Q9BQ15 211 aa7.03□□□□□ -1.28
LSM5-208ENST00000450169 SOX21Q9Y651 276 aaPredicted RBP7.03□□□□□ -1.28
LSM5-208ENST00000450169 USF3Q68DE3 2245 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 LINC00473A8K010 186 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 LAMTOR5O43504 91 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 CSN3P07498 182 aa7.02□□□□□ -1.29
LSM5-208ENST00000450169 CSN1S1P47710 185 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms