RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 SLC25A28Q96A46 364 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 HIST1H2BLQ99880 126 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 RP1L1Q8IWN7 2480 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 ZNF672Q499Z4 452 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 SNAI2O43623 268 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 RBMY1A1P0DJD3 496 aaKnown RBP11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 RBMY1CP0DJD4 496 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 FLVCR1-AS1Q8TAF5 88 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 WFDC12Q8WWY7 111 aa11.65□□□□□ -0.54
RAPGEF3-205ENST00000449771 IGLV3-32A0A0A0MS00 114 aa11.65□□□□□ -0.55
RAPGEF3-205ENST00000449771 NDUFA3O95167 84 aa11.65□□□□□ -0.55
RAPGEF3-205ENST00000449771 EFNA4P52798 201 aa11.65□□□□□ -0.55
RAPGEF3-205ENST00000449771 OR5A1Q8NGJ0 315 aa11.65□□□□□ -0.55
RAPGEF3-205ENST00000449771 TIMP3P35625 211 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 SCN10AQ9Y5Y9 1956 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 OR9G9P0C7N8 305 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 COLCA2A8K830 154 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 IGFBP3P17936 291 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 ST20Q9HBF5 79 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 MRPL16Q9NX20 251 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 TRAV41A0A0B4J266 112 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 TRBV7-9A0A0J9YWB2 115 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 A0A1B0GW15 77 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 RAMP3O60896 148 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 TMEM50AO95807 157 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 PAX8Q06710 450 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 DEFB121Q5J5C9 76 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 FAM166AQ6J272 317 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 C5orf30Q96GV9 206 aa11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 MTCL1Q9Y4B5 1905 aaKnown RBP11.64□□□□□ -0.55
RAPGEF3-205ENST00000449771 KNTC1P50748 2209 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 SRP19P09132 144 aaKnown RBP11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 LINC00271P0C7V0 271 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 TPTE2P1Q5T6R2 138 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 Q6AWC8 147 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 TMEM170AQ8WVE7 144 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 ASCL2Q99929 193 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 FABP5P3A8MUU1 101 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 BRCA1P38398 1863 aaKnown RBP11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 SHISA3A0PJX4 238 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 TMEM144Q7Z5S9 345 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 C18orf12Q96KH6 178 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 C20orf204Q6ZNR8 217 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 ZNF525Q8N782 197 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 IMMP2LQ96T52 175 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 MESP1Q9BRJ9 268 aa11.63□□□□□ -0.55
RAPGEF3-205ENST00000449771 IGKV1D-13A0A0B4J2D9 117 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 IL18BPO95998 194 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 IGKV1-13P0DP09 117 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 DTX2Q86UW9 622 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 TMEM219Q86XT9 240 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 TRAV21A0A0B4J279 112 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 HEPN1Q6WQI6 88 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 FGFBP3Q8TAT2 258 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 PATJQ8NI35 1801 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 TRGV11A0A075B6L2 103 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 CD33P20138 364 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 SIGLEC15Q6ZMC9 328 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 ORMDL3Q8N138 153 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 PSME4Q14997 1843 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 ANKRD36A6QL64 1941 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 TCF23Q7RTU1 214 aa11.62□□□□□ -0.55
RAPGEF3-205ENST00000449771 KLRD1Q13241 179 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 IGHV2-26A0A0B4J1V2 119 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 IZUMO1RA6ND01 250 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 ZNF815PA8K554 130 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 REG4Q9BYZ8 158 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 WNK3Q9BYP7 1800 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 ERVK11-1P61568 191 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 OR9G4Q8NGQ1 327 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 PLSCR4Q9NRQ2 329 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 TYMSP04818 313 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 ESDP10768 282 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 TDGF1P3P51864 188 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 UBE2V1Q13404 147 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 TNFSF13O75888 250 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 IFI27P40305 119 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 SSBP4Q9BWG4 385 aaPredicted RBP11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 ZNF257Q9Y2Q1 563 aa11.61□□□□□ -0.55
RAPGEF3-205ENST00000449771 PYY3Q5JQD4 70 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 TNFRSF14Q92956 283 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 HIGD1CA8MV81 97 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 MLNRO43193 412 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 C1orf194Q5T5A4 169 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 PRDM13Q9H4Q3 707 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 MAP1BP46821 2468 aaKnown RBP11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 SERF1AO75920 110 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 TTC9CQ8N5M4 171 aa11.6□□□□□ -0.55
RAPGEF3-205ENST00000449771 B4DSR2 109 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms