RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 BAP18Q8IXM2 172 aa15.04■□□□□ -0
RPS28-202ENST00000449223 VN1R17PQ8TDU5 208 aa15.04■□□□□ -0
RPS28-202ENST00000449223 WDR83OSQ9Y284 106 aa15.04■□□□□ -0
RPS28-202ENST00000449223 FAM223BA6NKX1 122 aa15.03■□□□□ -0
RPS28-202ENST00000449223 MPDU1O75352 247 aa15.03■□□□□ -0
RPS28-202ENST00000449223 IFNA5P01569 189 aa15.03■□□□□ -0
RPS28-202ENST00000449223 PSMB8P28062 276 aa15.03■□□□□ -0
RPS28-202ENST00000449223 FAM223AQ8IWN6 122 aa15.03■□□□□ -0
RPS28-202ENST00000449223 SCARB1Q8WTV0 552 aa15.03■□□□□ -0
RPS28-202ENST00000449223 ST8SIA2Q92186 375 aa15.03■□□□□ -0
RPS28-202ENST00000449223 SLC35E1Q96K37 410 aa15.03■□□□□ -0
RPS28-202ENST00000449223 GINS3Q9BRX5 216 aa15.03■□□□□ -0
RPS28-202ENST00000449223 UBE2L5PA0A1B0GUS4 154 aa15.02■□□□□ -0
RPS28-202ENST00000449223 NDUFB8O95169 186 aa15.02■□□□□ -0
RPS28-202ENST00000449223 SLC35B1P78383 322 aa15.02■□□□□ -0
RPS28-202ENST00000449223 RHOGP84095 191 aa15.02■□□□□ -0
RPS28-202ENST00000449223 MLANAQ16655 118 aa15.02■□□□□ -0
RPS28-202ENST00000449223 RNF152Q8N8N0 203 aa15.02■□□□□ -0
RPS28-202ENST00000449223 OR4X1Q8NH49 305 aa15.02■□□□□ -0
RPS28-202ENST00000449223 TAF15Q92804 592 aaKnown RBP eCLIP15.02■□□□□ -0
RPS28-202ENST00000449223 PHYHIPLQ96FC7 376 aa15.02■□□□□ -0
RPS28-202ENST00000449223 ATP6V0BQ99437 205 aa15.02■□□□□ -0
RPS28-202ENST00000449223 FBXL7Q9UJT9 491 aa15.02■□□□□ -0
RPS28-202ENST00000449223 OR2J3O76001 311 aa15.02□□□□□ -0.01
RPS28-202ENST00000449223 TEPPQ6URK8 271 aa15.02□□□□□ -0.01
RPS28-202ENST00000449223 CENPVQ7Z7K6 275 aaPredicted RBP15.02□□□□□ -0.01
RPS28-202ENST00000449223 THAP8Q8NA92 274 aa15.02□□□□□ -0.01
RPS28-202ENST00000449223 CXorf58Q96LI9 332 aa15.02□□□□□ -0.01
RPS28-202ENST00000449223 MRPL36Q9P0J6 103 aaKnown RBP15.02□□□□□ -0.01
RPS28-202ENST00000449223 IGKV1OR2-108A0A075B7D4 117 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 ELANEP08246 267 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 AKR1C1Q04828 323 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 FOXE3Q13461 319 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 C15orf32Q32M92 178 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 TEX38Q6PEX7 206 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 COMMD1Q8N668 190 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 MYOZ3Q8TDC0 251 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 WIPF2Q8TF74 440 aaPredicted RBP15.01□□□□□ -0.01
RPS28-202ENST00000449223 USMG5Q96IX5 58 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 TXN2Q99757 166 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 ZNF355PQ9NSJ1 428 aa15.01□□□□□ -0.01
RPS28-202ENST00000449223 SMCO3A2RU48 225 aa15□□□□□ -0.01
RPS28-202ENST00000449223 PSMB11A5LHX3 300 aa15□□□□□ -0.01
RPS28-202ENST00000449223 MFSD2BA6NFX1 497 aa15□□□□□ -0.01
RPS28-202ENST00000449223 SPP1P10451 314 aa15□□□□□ -0.01
RPS28-202ENST00000449223 RND2P52198 227 aa15□□□□□ -0.01
RPS28-202ENST00000449223 TEX261Q6UWH6 196 aa15□□□□□ -0.01
RPS28-202ENST00000449223 BTNL8Q6UX41 500 aa15□□□□□ -0.01
RPS28-202ENST00000449223 SCGB1C1Q8TD33 95 aa15□□□□□ -0.01
RPS28-202ENST00000449223 GNPNAT1Q96EK6 184 aaPredicted RBP15□□□□□ -0.01
RPS28-202ENST00000449223 PSMG3Q9BT73 122 aaPredicted RBP15□□□□□ -0.01
RPS28-202ENST00000449223 C21orf62Q9NYP8 219 aa15□□□□□ -0.01
RPS28-202ENST00000449223 TIMM9Q9Y5J7 89 aa15□□□□□ -0.01
RPS28-202ENST00000449223 C2CD3Q4AC94 2353 aa15□□□□□ -0.01
RPS28-202ENST00000449223 F8W735 103 aaPredicted RBP14.99□□□□□ -0.01
RPS28-202ENST00000449223 TRGV3P03979 118 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 SEC11BP0C7V7 166 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 ATP6V0CP27449 155 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 RAB9AP51151 201 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 ZNF329Q86UD4 541 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 LINC01006Q8NI28 216 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 ZNF502Q8TBZ5 544 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 NPIPB3Q92617 1050 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 MS4A10Q96PG2 267 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 NPCDR1Q9BY65 106 aa14.99□□□□□ -0.01
RPS28-202ENST00000449223 CLN5O75503 358 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 CFDP00746 253 aaPredicted RBP14.98□□□□□ -0.01
RPS28-202ENST00000449223 FGF7P21781 194 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 NPBWR1P48145 328 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 MFAP4P55083 255 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 IFITM2Q01629 132 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 HSD17B11Q8NBQ5 300 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 ACY3Q96HD9 319 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 MGST2Q99735 147 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 KLK15Q9H2R5 256 aa14.98□□□□□ -0.01
RPS28-202ENST00000449223 IGKV1D-37A0A075B6S9 117 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 TRBV7-1A0A0A6YYK4 115 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 IGHV3-21A0A0B4J1V1 117 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 A0A0G2JLM5 398 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 IGHV3-48P01763 117 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 TPPP2P59282 170 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 RUNX1Q01196 453 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 RAB31Q13636 194 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 EIF5AL1Q6IS14 154 aaKnown RBP14.97□□□□□ -0.01
RPS28-202ENST00000449223 ACSM6Q6P461 480 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 OR2G3Q8NGZ4 309 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 OR4F5Q8NH21 305 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 TRGV9Q99603 122 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 GGTLC1Q9BX51 225 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 IGLC1P0CG04 106 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 PF4V1P10720 104 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 ATP5G2Q06055 141 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 KIAA0141Q14154 515 aaPredicted RBP14.97□□□□□ -0.01
RPS28-202ENST00000449223 KLHDC1Q8N7A1 406 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 ZNF680Q8NEM1 530 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 EEF1AKMT3Q96AZ1 226 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 CCDC140Q96MF4 163 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 RSG1Q9BU20 258 aa14.97□□□□□ -0.01
RPS28-202ENST00000449223 GAR1Q9NY12 217 aaKnown RBP14.97□□□□□ -0.01
RPS28-202ENST00000449223 TRAV30A0A087WSZ9 112 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms