RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CACNG8Q8WXS5 425 aa11.05□□□□□ -0.64
USP39-206ENST00000448971 ATP6V0BQ99437 205 aa11.05□□□□□ -0.64
USP39-206ENST00000448971 FLVCR2Q9UPI3 526 aa11.05□□□□□ -0.64
USP39-206ENST00000448971 UFC1Q9Y3C8 167 aa11.05□□□□□ -0.64
USP39-206ENST00000448971 TMEM213A2RRL7 107 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 F8W735 103 aaPredicted RBP11.04□□□□□ -0.64
USP39-206ENST00000448971 FOLR2P14207 255 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 HTR2BP41595 481 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 RELQ04864 619 aaPredicted RBP11.04□□□□□ -0.64
USP39-206ENST00000448971 C4orf46Q504U0 113 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 OR2K2Q8NGT1 345 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 TMEM190Q8WZ59 177 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 CHRDL1Q9BU40 450 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 C20orf24Q9BUV8 137 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 HIPK2Q9H2X6 1198 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 SMAD5-AS1Q9Y6J3 95 aa11.04□□□□□ -0.64
USP39-206ENST00000448971 A0A1B0GU03 582 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 NDUFA4O00483 81 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 ANXA7P20073 488 aaKnown RBP11.03□□□□□ -0.64
USP39-206ENST00000448971 NPBWR1P48145 328 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 TNFRSF9Q07011 255 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 CD300EQ496F6 205 aaPredicted RBP11.03□□□□□ -0.64
USP39-206ENST00000448971 GTSCR1Q86UQ5 136 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 LRTM2Q8N967 370 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 DUSP18Q8NEJ0 188 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 COQ8AQ8NI60 647 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 MUC7Q8TAX7 377 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 DTD1Q8TEA8 209 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 TXN2Q99757 166 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 ZNF436Q9C0F3 470 aaPredicted RBP11.03□□□□□ -0.64
USP39-206ENST00000448971 WDR12Q9GZL7 423 aaKnown RBP11.03□□□□□ -0.64
USP39-206ENST00000448971 C20orf85Q9H1P6 137 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 BATF3Q9NR55 127 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 TMED3Q9Y3Q3 217 aa11.03□□□□□ -0.64
USP39-206ENST00000448971 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 RPS10-NUDT3A0A1W2PQS6 291 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 C9orf170A2RU37 121 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 SCGB2A1O75556 95 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 HOXB5P09067 269 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 OR4E1P0C645 316 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 CBLN1P23435 193 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 NPY1RP25929 384 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 ADMP35318 185 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 BSXQ3C1V8 233 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 TM4SF20Q53R12 229 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 BTNL8Q6UX41 500 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 ADAMTSL5Q6ZMM2 481 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 UXS1Q8NBZ7 420 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 DAZ1Q9NQZ3 744 aaKnown RBP11.02□□□□□ -0.65
USP39-206ENST00000448971 TECRQ9NZ01 308 aaKnown RBP11.02□□□□□ -0.65
USP39-206ENST00000448971 HSPB7Q9UBY9 170 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 SELENOKQ9Y6D0 94 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 LYSTQ99698 3801 aa11.02□□□□□ -0.65
USP39-206ENST00000448971 IZUMO1RA6ND01 250 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 PLA2G10O15496 165 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 YIF1AO95070 293 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 IFNA10P01566 189 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 FCGR2BP31994 310 aaPredicted RBP11.01□□□□□ -0.65
USP39-206ENST00000448971 DHRS2Q13268 280 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 ZNF846Q147U1 533 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 GUCA2BQ16661 112 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 C2orf83Q53S99 150 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 LYG2Q86SG7 212 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 MARC2Q969Z3 335 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 RBKSQ9H477 322 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 CSMD3Q7Z407 3707 aa11.01□□□□□ -0.65
USP39-206ENST00000448971 ZNF207O43670 478 aaKnown RBP11□□□□□ -0.65
USP39-206ENST00000448971 CTSGP08311 255 aa11□□□□□ -0.65
USP39-206ENST00000448971 ELLP55199 621 aaPredicted RBP11□□□□□ -0.65
USP39-206ENST00000448971 DEFB114Q30KQ6 69 aa11□□□□□ -0.65
USP39-206ENST00000448971 GGNBP1Q5YKI7 109 aa11□□□□□ -0.65
USP39-206ENST00000448971 PVRIGQ6DKI7 326 aa11□□□□□ -0.65
USP39-206ENST00000448971 NOXA1Q86UR1 476 aa11□□□□□ -0.65
USP39-206ENST00000448971 WDR89Q96FK6 387 aaPredicted RBP11□□□□□ -0.65
USP39-206ENST00000448971 FNDC4Q9H6D8 234 aaPredicted RBP11□□□□□ -0.65
USP39-206ENST00000448971 MRPL27Q9P0M9 148 aaKnown RBP11□□□□□ -0.65
USP39-206ENST00000448971 MLXQ9UH92 298 aa11□□□□□ -0.65
USP39-206ENST00000448971 TRAV6A0A075B6T7 132 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 ADAP1O75689 374 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 TCRBP04435 133 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 IAPPP10997 89 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 SLC25A6P12236 298 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 CD81P60033 236 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 SBSPONQ8IVN8 264 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 TMEM61Q8N0U2 210 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 RNASEH2CQ8TDP1 164 aaKnown RBP10.99□□□□□ -0.65
USP39-206ENST00000448971 NUDT15Q9NV35 164 aa10.99□□□□□ -0.65
USP39-206ENST00000448971 FAM90A26D6RGX4 464 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 CLN5O75503 358 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 MED6O75586 246 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 SCAF4O95104 1147 aaKnown RBP10.98□□□□□ -0.65
USP39-206ENST00000448971 IFNA21P01568 189 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 RND2P52198 227 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 ETFRF1Q6IPR1 90 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 MZT2BQ6NZ67 158 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 ZNF600Q6ZNG1 722 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 RBPMS2Q6ZRY4 209 aaKnown RBP10.98□□□□□ -0.65
USP39-206ENST00000448971 OR52B4Q8NGK2 314 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 GINS3Q9BRX5 216 aa10.98□□□□□ -0.65
USP39-206ENST00000448971 PAIP2BQ9ULR5 123 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms