RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TMEM61Q8N0U2 210 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 DUSP18Q8NEJ0 188 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 TXN2Q99757 166 aa11.18□□□□□ -0.62
HDAC4-204ENST00000446876 GAR1Q9NY12 217 aaKnown RBP11.18□□□□□ -0.62
HDAC4-204ENST00000446876 TECRQ9NZ01 308 aaKnown RBP11.18□□□□□ -0.62
HDAC4-204ENST00000446876 PITX3O75364 302 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 ADAP1O75689 374 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 YIF1AO95070 293 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 SCAF4O95104 1147 aaKnown RBP11.17□□□□□ -0.62
HDAC4-204ENST00000446876 OR4E1P0C645 316 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 FRMD6-AS1P0C7T7 363 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 C8orf88P0DMB2 117 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 IGHV4-30-4P0DP06 118 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 NPY1RP25929 384 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 ELLP55199 621 aaPredicted RBP11.17□□□□□ -0.62
HDAC4-204ENST00000446876 UBE2MP61081 183 aaKnown RBP11.17□□□□□ -0.62
HDAC4-204ENST00000446876 DHRS2Q13268 280 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 GGNBP1Q5YKI7 109 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 DTD1Q8TEA8 209 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 CCDC32Q9BV29 185 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 C20orf85Q9H1P6 137 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 HIPK2Q9H2X6 1198 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 DAZ1Q9NQZ3 744 aaKnown RBP11.17□□□□□ -0.62
HDAC4-204ENST00000446876 PTTG2Q9NZH5 202 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 COL7A1Q02388 2944 aa11.17□□□□□ -0.62
HDAC4-204ENST00000446876 IGHV3-49A0A0A0MS15 119 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 CD7P09564 240 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 IAPPP10997 89 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 NPBWR1P48145 328 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 CD81P60033 236 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 RELQ04864 619 aaPredicted RBP11.16□□□□□ -0.62
HDAC4-204ENST00000446876 C4orf46Q504U0 113 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 LINC00299Q6ZSB3 139 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 LYG2Q86SG7 212 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 OR52B4Q8NGK2 314 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 MARC2Q969Z3 335 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 WFDC10AQ9H1F0 79 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 MRPL27Q9P0M9 148 aaKnown RBP11.16□□□□□ -0.62
HDAC4-204ENST00000446876 TMED3Q9Y3Q3 217 aa11.16□□□□□ -0.62
HDAC4-204ENST00000446876 TRAV6A0A075B6T7 132 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 MPTX1A8MV57 137 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 TMEM50AO95807 157 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 IFNA10P01566 189 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 SBSPONQ8IVN8 264 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 S100ZQ8WXG8 99 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 NEURL2Q9BR09 285 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 MAGT1Q9H0U3 335 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 TBC1D24Q9ULP9 559 aa11.15□□□□□ -0.62
HDAC4-204ENST00000446876 IGHV3OR16-13A0A075B7E8 117 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 IGHV3-74A0A0B4J1X5 117 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 PIGBOS1A0A0B4J2F0 54 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 RPS10-NUDT3A0A1W2PQS6 291 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 C15orf62A8K5M9 175 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 CLN5O75503 358 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 TCRBP04435 133 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 RND2P52198 227 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 TIGITQ495A1 244 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 PRSS54Q6PEW0 395 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 TOMM20LQ6UXN7 152 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 OR4X1Q8NH49 305 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 COQ8AQ8NI60 647 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 RNASEH2CQ8TDP1 164 aaKnown RBP11.14□□□□□ -0.63
HDAC4-204ENST00000446876 ZFAND3Q9H8U3 227 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 CACFD1Q9UGQ2 172 aa11.14□□□□□ -0.63
HDAC4-204ENST00000446876 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
HDAC4-204ENST00000446876 HUWE1Q7Z6Z7 4374 aaKnown RBP11.14□□□□□ -0.63
HDAC4-204ENST00000446876 IGHV7-4-1A0A0J9YVY3 117 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 K7EMT4 169 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 SLC25A6P12236 298 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 ZNF600Q6ZNG1 722 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 OR10C1Q96KK4 312 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 NUDT15Q9NV35 164 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 C19orf73Q9NVV2 129 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 SMPXQ9UHP9 88 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 U3KQ87 197 aa11.13□□□□□ -0.63
HDAC4-204ENST00000446876 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 ZNF846Q147U1 533 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
HDAC4-204ENST00000446876 SLC16A13Q7RTY0 426 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 DEFB125Q8N687 156 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 ACY3Q96HD9 319 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 SEC22CQ9BRL7 303 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 WDR12Q9GZL7 423 aaKnown RBP11.12□□□□□ -0.63
HDAC4-204ENST00000446876 BATF3Q9NR55 127 aa11.12□□□□□ -0.63
HDAC4-204ENST00000446876 PAIP2BQ9ULR5 123 aaKnown RBP11.12□□□□□ -0.63
HDAC4-204ENST00000446876 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 FAM90A26D6RGX4 464 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 WRBO00258 174 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 CHEK1O14757 476 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 SYNGR2O43760 224 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 UPK1BO75841 260 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
HDAC4-204ENST00000446876 IFNA4P05014 189 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 IGLC1P0CG04 106 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 SLC25A4P12235 298 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 IFITM3Q01628 133 aa11.11□□□□□ -0.63
HDAC4-204ENST00000446876 NOXA1Q86UR1 476 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms