RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 RBPMS2Q6ZRY4 209 aaKnown RBP14.01□□□□□ -0.17
CCDC188-202ENST00000444532 WWC2-AS2Q96NR7 200 aa14.01□□□□□ -0.17
CCDC188-202ENST00000444532 HIPK2Q9H2X6 1198 aa14.01□□□□□ -0.17
CCDC188-202ENST00000444532 A0A1B0GU03 582 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 CD7P09564 240 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 VAMP1P23763 118 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 OPRK1P41145 380 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 SLC16A13Q7RTY0 426 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 CENPSQ8N2Z9 138 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 LRTM2Q8N967 370 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 ZNF414Q96IQ9 312 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 OR10C1Q96KK4 312 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 ZMAT4Q9H898 229 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 HSPB7Q9UBY9 170 aa14□□□□□ -0.17
CCDC188-202ENST00000444532 IGHV3OR16-8A0A075B7F1 116 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 CENPXA8MT69 81 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 YIF1AO95070 293 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 SCAF4O95104 1147 aaKnown RBP13.99□□□□□ -0.17
CCDC188-202ENST00000444532 TMEM50AO95807 157 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 UBE2MP61081 183 aaKnown RBP13.99□□□□□ -0.17
CCDC188-202ENST00000444532 TNFRSF9Q07011 255 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 LAMTOR1Q6IAA8 161 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 NOXA1Q86UR1 476 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 OR4X1Q8NH49 305 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 RNASEH2CQ8TDP1 164 aaKnown RBP13.99□□□□□ -0.17
CCDC188-202ENST00000444532 C7orf50Q9BRJ6 194 aaKnown RBP13.99□□□□□ -0.17
CCDC188-202ENST00000444532 FNDC4Q9H6D8 234 aaPredicted RBP13.99□□□□□ -0.17
CCDC188-202ENST00000444532 SMPXQ9UHP9 88 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 SELENOKQ9Y6D0 94 aa13.99□□□□□ -0.17
CCDC188-202ENST00000444532 RPS10-NUDT3A0A1W2PQS6 291 aa13.98□□□□□ -0.17
CCDC188-202ENST00000444532 OR11H12B2RN74 326 aa13.98□□□□□ -0.17
CCDC188-202ENST00000444532 SFT2D2O95562 160 aa13.98□□□□□ -0.17
CCDC188-202ENST00000444532 SLC25A6P12236 298 aa13.98□□□□□ -0.17
CCDC188-202ENST00000444532 SLC24A4Q8NFF2 622 aa13.98□□□□□ -0.17
CCDC188-202ENST00000444532 OR52B4Q8NGK2 314 aa13.98□□□□□ -0.17
CCDC188-202ENST00000444532 TM2D3Q9BRN9 247 aa13.98□□□□□ -0.17
CCDC188-202ENST00000444532 TRAV14DV4A0A0A6YYC5 116 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 TSPAN4O14817 238 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 ZNF207O43670 478 aaKnown RBP13.97□□□□□ -0.17
CCDC188-202ENST00000444532 CLN5O75503 358 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 SCGB2A1O75556 95 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 NDUFB6O95139 128 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 NXPH3O95157 252 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 IL7P13232 177 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 PPP1R1AQ13522 171 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 MLANAQ16655 118 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 ZNF600Q6ZNG1 722 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 OR1S1Q8NH92 325 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 RCHY1Q96PM5 261 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 SPAG8Q99932 426 aaPredicted RBP13.97□□□□□ -0.17
CCDC188-202ENST00000444532 GINS3Q9BRX5 216 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 TMED3Q9Y3Q3 217 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 U3KQ87 197 aa13.97□□□□□ -0.17
CCDC188-202ENST00000444532 TRAV30A0A087WSZ9 112 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 IGHV7-4-1A0A0J9YVY3 117 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 LINC00854A0A1B0GVQ3 168 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 SLC25A4P12235 298 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 NPY1RP25929 384 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 ATP5IP56385 69 aaPredicted RBP13.96□□□□□ -0.17
CCDC188-202ENST00000444532 ETFRF1Q6IPR1 90 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 TOMM20LQ6UXN7 152 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 LINC00322Q6ZN03 302 aaPredicted RBP13.96□□□□□ -0.17
CCDC188-202ENST00000444532 DEFB125Q8N687 156 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 TMEM116Q8NCL8 245 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 DTD1Q8TEA8 209 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 S100ZQ8WXG8 99 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 RBKSQ9H477 322 aa13.96□□□□□ -0.17
CCDC188-202ENST00000444532 CHEK1O14757 476 aa13.95□□□□□ -0.18
CCDC188-202ENST00000444532 PITX3O75364 302 aa13.95□□□□□ -0.18
CCDC188-202ENST00000444532 IFNA10P01566 189 aa13.95□□□□□ -0.18
CCDC188-202ENST00000444532 HAGHQ16775 308 aa13.95□□□□□ -0.18
CCDC188-202ENST00000444532 RHPN1-AS1Q9BWJ2 59 aa13.95□□□□□ -0.18
CCDC188-202ENST00000444532 MRPL36Q9P0J6 103 aaKnown RBP13.95□□□□□ -0.18
CCDC188-202ENST00000444532 PUS1Q9Y606 427 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC188-202ENST00000444532 FAM90A26D6RGX4 464 aa13.94□□□□□ -0.18
CCDC188-202ENST00000444532 TMEM170AQ8WVE7 144 aa13.94□□□□□ -0.18
CCDC188-202ENST00000444532 SRD5A3Q9H8P0 318 aa13.94□□□□□ -0.18
CCDC188-202ENST00000444532 C9orf170A2RU37 121 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 CD5P06127 495 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 BTCP35070 178 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 BMI1P35226 326 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 PRSS54Q6PEW0 395 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 SPATA25Q9BR10 227 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 CCDC32Q9BV29 185 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 WFDC10AQ9H1F0 79 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 ZFAND3Q9H8U3 227 aa13.93□□□□□ -0.18
CCDC188-202ENST00000444532 RBMY1BA6NDE4 496 aaKnown RBP13.92□□□□□ -0.18
CCDC188-202ENST00000444532 RBMY1EA6NEQ0 496 aaKnown RBP13.92□□□□□ -0.18
CCDC188-202ENST00000444532 OR4C46A6NHA9 309 aa13.92□□□□□ -0.18
CCDC188-202ENST00000444532 PLA2G10O15496 165 aa13.92□□□□□ -0.18
CCDC188-202ENST00000444532 MED6O75586 246 aa13.92□□□□□ -0.18
CCDC188-202ENST00000444532 IGKV1-17P01599 117 aa13.92□□□□□ -0.18
CCDC188-202ENST00000444532 RBMY1DP0C7P1 496 aaKnown RBP13.92□□□□□ -0.18
CCDC188-202ENST00000444532 ZNF846Q147U1 533 aa13.92□□□□□ -0.18
CCDC188-202ENST00000444532 RNF2Q99496 336 aa13.92□□□□□ -0.18
CCDC188-202ENST00000444532 FLVCR2Q9UPI3 526 aa13.92□□□□□ -0.18
CCDC188-202ENST00000444532 IGHV3-49A0A0A0MS15 119 aa13.91□□□□□ -0.18
CCDC188-202ENST00000444532 HOXB5P09067 269 aa13.91□□□□□ -0.18
CCDC188-202ENST00000444532 OR4E1P0C645 316 aa13.91□□□□□ -0.18
CCDC188-202ENST00000444532 RND2P52198 227 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms