RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 PRSS8Q16651 343 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 BEND2Q8NDZ0 799 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 CACNG8Q8WXS5 425 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 MBNL3Q9NUK0 354 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 PEMTQ9UBM1 199 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV3-49A0A0A0MS15 119 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 PAGE4O60829 102 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV2-5P01817 119 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 NSUN5P1Q3KNT7 163 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 SHANK1Q9Y566 2161 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 ZNF207O43670 478 aaKnown RBP11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 COL5A1-AS1Q5SY13 56 aa11.54□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 H0YJW9 148 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 Q5BKY6 102 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 TMEM78Q5T7P6 136 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 Q6ZS49 121 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 OR4B1Q8NGF8 309 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV4-61A0A0C4DH41 118 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 IGHV2-70P01814 119 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 Q6ZN92 141 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 COL5A1P20908 1838 aaPredicted RBP11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 SIAH2O43255 324 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 C8orf88P0DMB2 117 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 SNRPD3P62318 126 aaKnown RBP11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 FAM71F2Q6NXP2 309 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 GATAD1Q8WUU5 269 aa11.53□□□□□ -0.56
SMARCA4-204ENST00000444061 C19orf84I3L1E1 186 aa11.52□□□□□ -0.56
SMARCA4-204ENST00000444061 RPL30P62888 115 aaKnown RBP11.52□□□□□ -0.56
SMARCA4-204ENST00000444061 CYP2G1PQ6ZSU1 146 aa11.52□□□□□ -0.56
SMARCA4-204ENST00000444061 DTX2Q86UW9 622 aa11.52□□□□□ -0.56
SMARCA4-204ENST00000444061 GOLT1BQ9Y3E0 138 aa11.52□□□□□ -0.56
SMARCA4-204ENST00000444061 LRP4O75096 1905 aa11.52□□□□□ -0.56
SMARCA4-204ENST00000444061 NOTCH3Q9UM47 2321 aa11.52□□□□□ -0.56
SMARCA4-204ENST00000444061 PDE6DO43924 150 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 AMTP48728 403 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 PRCDQ00LT1 54 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 GUSBP1Q15486 140 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 C10orf55Q5SWW7 151 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 LHFPL1Q86WI0 220 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 C3orf56Q8N813 242 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 GGACTQ9BVM4 153 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 DNAH12Q6ZR08 3092 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 CD99P14209 185 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 LHFPL4Q7Z7J7 247 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 OR10G8Q8NGN5 311 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 PRR14LQ5THK1 2151 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 ELOBQ15370 118 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 GSX1Q9H4S2 264 aaPredicted RBP11.52□□□□□ -0.57
SMARCA4-204ENST00000444061 TEX50A0A1B0GTY4 177 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 F5H697 171 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 ITGB1BP1O14713 200 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 ORM1P02763 201 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 MYOD1P15172 320 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 TUBA4BQ9H853 241 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 IGHV3OR16-8A0A075B7F1 116 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 TMEM249Q2WGJ8 235 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 REC114Q7Z4M0 266 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 RAX2Q96IS3 184 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 C1orf147Q96MC9 270 aaPredicted RBP11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 FAM90A9PA6NNJ1 464 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
SMARCA4-204ENST00000444061 OR2T8A6NH00 312 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 CX3CL1P78423 397 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 LINC00469Q8N7U9 141 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 HIST1H2BAQ96A08 127 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 JKAMPQ9P055 326 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 SONP18583 2426 aaKnown RBP11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 FUT9Q9Y231 359 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 ZNF257Q9Y2Q1 563 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 C22orf46C9J442 243 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 CFPP27918 469 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 C18orf12Q96KH6 178 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 TMEM191AQ9H0A3 160 aa11.5□□□□□ -0.57
SMARCA4-204ENST00000444061 PGPA6NDG6 321 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 CGB1A6NKQ9 187 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 BCL2P10415 239 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 FA2HQ7L5A8 372 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 KIR3DL3Q8N743 410 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 IGSF23A1L1A6 192 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 GPX4P36969 197 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 IL17RELQ6ZVW7 336 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 IGHV3-66A0A0C4DH42 116 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 DLX1P56177 255 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 TEX38Q6PEX7 206 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 SIGLEC9Q9Y336 463 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 A0A0B4J293 547 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 LINC00473A8K010 186 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 PSG9Q00887 426 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 KRTAP27-1Q3LI81 207 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 C11orf53Q8IXP5 236 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 UFC1Q9Y3C8 167 aa11.49□□□□□ -0.57
SMARCA4-204ENST00000444061 LOC102723971A0A1B0GUV8 181 aa11.48□□□□□ -0.57
SMARCA4-204ENST00000444061 K7ERU9 68 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms