RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 EBAG9O00559 213 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 IGKV1-39P01597 117 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 IGKV1D-39P04432 117 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 ZNF705DP0CH99 300 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-208ENST00000443046 ZNF705BP0CI00 300 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-208ENST00000443046 RFX2P48378 723 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 PPP5CP53041 499 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 ERHP84090 104 aaKnown RBP10.23□□□□□ -0.77
HMGN1-208ENST00000443046 TNP2Q05952 138 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 CMTM1Q8IZ96 169 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 TSPAN14Q8NG11 270 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 METTL26Q96S19 204 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 EHFQ9NZC4 300 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 MRPL36Q9P0J6 103 aaKnown RBP10.23□□□□□ -0.77
HMGN1-208ENST00000443046 ANAPC10Q9UM13 185 aa10.23□□□□□ -0.77
HMGN1-208ENST00000443046 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 SMIM9A6NGZ8 99 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 H3BMM0 161 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 GPR31O00270 319 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 NUTF2P61970 127 aaKnown RBP10.22□□□□□ -0.77
HMGN1-208ENST00000443046 OR4A16Q8NH70 328 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 NRG4Q8WWG1 115 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 FXYD6Q9H0Q3 95 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 SEPSECSQ9HD40 501 aaKnown RBP10.22□□□□□ -0.77
HMGN1-208ENST00000443046 XCL2Q9UBD3 114 aa10.22□□□□□ -0.77
HMGN1-208ENST00000443046 MEIS3P1A6NDR6 274 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 HELTA6NFD8 242 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 CLN5O75503 358 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 NAT1P18440 290 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 DHRS2Q13268 280 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 OXA1LQ15070 435 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 PSMG4Q5JS54 123 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 H2BFWTQ7Z2G1 175 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 FNDC4Q9H6D8 234 aaPredicted RBP10.21□□□□□ -0.77
HMGN1-208ENST00000443046 DKK2Q9UBU2 259 aa10.21□□□□□ -0.77
HMGN1-208ENST00000443046 IGKV1-17P01599 117 aa10.2□□□□□ -0.78
HMGN1-208ENST00000443046 SDC2P34741 201 aa10.2□□□□□ -0.78
HMGN1-208ENST00000443046 FAM3BP58499 235 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-208ENST00000443046 C16orf54Q6UWD8 224 aa10.2□□□□□ -0.78
HMGN1-208ENST00000443046 OR4X1Q8NH49 305 aa10.2□□□□□ -0.78
HMGN1-208ENST00000443046 GLMPQ8WWB7 406 aa10.2□□□□□ -0.78
HMGN1-208ENST00000443046 DIABLOQ9NR28 239 aa10.2□□□□□ -0.78
HMGN1-208ENST00000443046 DMBT1Q9UGM3 2413 aaPredicted RBP10.2□□□□□ -0.78
HMGN1-208ENST00000443046 MYCBP2O75592 4640 aa10.2□□□□□ -0.78
HMGN1-208ENST00000443046 VPS13BQ7Z7G8 4022 aa10.19□□□□□ -0.78
HMGN1-208ENST00000443046 FAT1Q14517 4588 aa10.19□□□□□ -0.78
HMGN1-208ENST00000443046 FAM90A26D6RGX4 464 aa10.19□□□□□ -0.78
HMGN1-208ENST00000443046 PMP2P02689 132 aa10.19□□□□□ -0.78
HMGN1-208ENST00000443046 CLEC2LP0C7M8 214 aa10.19□□□□□ -0.78
HMGN1-208ENST00000443046 RPL5P46777 297 aaKnown RBP10.19□□□□□ -0.78
HMGN1-208ENST00000443046 AP2S1P53680 142 aaPredicted RBP10.19□□□□□ -0.78
HMGN1-208ENST00000443046 MLANAQ16655 118 aa10.19□□□□□ -0.78
HMGN1-208ENST00000443046 NIPSNAP3BQ9BS92 247 aa10.19□□□□□ -0.78
HMGN1-208ENST00000443046 TEX48A0A1B0GUV7 120 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 CORTO00230 105 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 P0C879 139 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 RNASE2P10153 161 aaKnown RBP10.18□□□□□ -0.78
HMGN1-208ENST00000443046 HLA-DRB4P13762 266 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 SNCAP37840 140 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 EIF2B2P49770 351 aaKnown RBP10.18□□□□□ -0.78
HMGN1-208ENST00000443046 EMP1P54849 157 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 PHLDA2Q53GA4 152 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 SPINK9Q5DT21 86 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 FAM222AQ5U5X8 452 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 TBC1D26Q86UD7 250 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 LYSMD2Q8IV50 215 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 TMEM230Q96A57 120 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 MRGPRFQ96AM1 343 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 NARS2Q96I59 477 aaKnown RBP10.18□□□□□ -0.78
HMGN1-208ENST00000443046 RNF167Q9H6Y7 350 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 SCRT2Q9NQ03 307 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 IFT46Q9NQC8 304 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 RFNGQ9Y644 331 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 HLA-DRB4X5D2U9 266 aa10.18□□□□□ -0.78
HMGN1-208ENST00000443046 A0A0B4J293 547 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 TAS2R46P59540 309 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 SNRPD3P62318 126 aaKnown RBP10.17□□□□□ -0.78
HMGN1-208ENST00000443046 MXD1Q05195 221 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 IZUMO4Q1ZYL8 232 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 BSXQ3C1V8 233 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 TIGITQ495A1 244 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 IDNKQ5T6J7 187 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 OR5H2Q8NGV7 314 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 OR6F1Q8NGZ6 308 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 BLOC1S6Q9UL45 172 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 SSR3Q9UNL2 185 aa10.17□□□□□ -0.78
HMGN1-208ENST00000443046 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
HMGN1-208ENST00000443046 IGKV1-5P01602 117 aa10.16□□□□□ -0.78
HMGN1-208ENST00000443046 HNRNPCP07910 306 aaKnown RBP eCLIP10.16□□□□□ -0.785e-6■■■□□ 18.1
HMGN1-208ENST00000443046 LPCAT3Q6P1A2 487 aa10.16□□□□□ -0.78
HMGN1-208ENST00000443046 TMEM88Q6PEY1 159 aa10.16□□□□□ -0.78
HMGN1-208ENST00000443046 C6orf223Q8N319 242 aa10.16□□□□□ -0.78
HMGN1-208ENST00000443046 CLUHP3Q96NS8 147 aa10.16□□□□□ -0.78
HMGN1-208ENST00000443046 YTHDF1Q9BYJ9 559 aaKnown RBP10.16□□□□□ -0.78
HMGN1-208ENST00000443046 NRN1Q9NPD7 142 aa10.16□□□□□ -0.78
HMGN1-208ENST00000443046 TRAV30A0A087WSZ9 112 aa10.15□□□□□ -0.78
HMGN1-208ENST00000443046 NKX2-1P43699 371 aaPredicted RBP10.15□□□□□ -0.78
HMGN1-208ENST00000443046 SUB1P53999 127 aaKnown RBP eCLIP10.15□□□□□ -0.78
HMGN1-208ENST00000443046 LCE2DQ5TA82 110 aaPredicted RBP10.15□□□□□ -0.78
HMGN1-208ENST00000443046 GDF5OSQ5U4N7 250 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms