RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 WNT10AQ9GZT5 417 aa11.58□□□□□ -0.56
LINC00299-202ENST00000442956 SOX21Q9Y651 276 aaPredicted RBP11.58□□□□□ -0.56
LINC00299-202ENST00000442956 LINC00869P0C866 280 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 RND2P52198 227 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 DEFA5Q01523 94 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 RASL11BQ9BPW5 248 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 SLC25A33Q9BSK2 321 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 MEGF9Q9H1U4 602 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 UNC79Q9P2D8 2635 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 IGHV3-21A0A0B4J1V1 117 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 IGHV7-81A0A0B4J1V7 117 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 A0A1W2PPV4 95 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 SCO1O75880 301 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 HLA-DRB1P01911 266 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 CRYGCP07315 174 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
LINC00299-202ENST00000442956 C10orf91Q5T1B1 145 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 Q96MF0 132 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 SEC11CQ9BY50 192 aa11.57□□□□□ -0.56
LINC00299-202ENST00000442956 ZFP92A6NM28 416 aa11.56□□□□□ -0.56
LINC00299-202ENST00000442956 MT-CO2P00403 227 aa11.56□□□□□ -0.56
LINC00299-202ENST00000442956 CCDC168Q8NDH2 2452 aa11.56□□□□□ -0.56
LINC00299-202ENST00000442956 PIFOQ8TCI5 191 aa11.56□□□□□ -0.56
LINC00299-202ENST00000442956 ICAM4Q14773 271 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 ZNF506Q5JVG8 444 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 ASPHD1Q5U4P2 390 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 PRSS57Q6UWY2 283 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 TMEM219Q86XT9 240 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 KRTAP1-3Q8IUG1 177 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 THAP8Q8NA92 274 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 SMDT1Q9H4I9 107 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 CARHSP1Q9Y2V2 147 aaKnown RBP11.55□□□□□ -0.56
LINC00299-202ENST00000442956 J3QLI3 93 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 IGHV4-31P0DP07 118 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 GUCA2BQ16661 112 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 TMEM249Q2WGJ8 235 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 CYP2G1PQ6ZSU1 146 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 RXFP4Q8TDU9 374 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 C22orf15Q8WYQ4 148 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 SSX3Q99909 188 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 HSPB9Q9BQS6 159 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 SLC35B3Q9H1N7 401 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
LINC00299-202ENST00000442956 IGKV1D-37A0A075B6S9 117 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 LOC102723971A0A1B0GUV8 181 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 FBP1P09467 338 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 BCL2P10415 239 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 EGR2P11161 476 aaPredicted RBP11.54□□□□□ -0.56
LINC00299-202ENST00000442956 IQCF2Q8IXL9 164 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 TMEM116Q8NCL8 245 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 SEPSECSQ9HD40 501 aaKnown RBP11.54□□□□□ -0.56
LINC00299-202ENST00000442956 NPIPB5A8MRT5 1133 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 I3L2K1 104 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 ZNF90Q03938 601 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 KHDC3LQ587J8 217 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 OR1L6Q8NGR2 347 aa11.54□□□□□ -0.56
LINC00299-202ENST00000442956 RBM14Q96PK6 669 aaKnown RBP11.54□□□□□ -0.56
LINC00299-202ENST00000442956 ITPR2Q14571 2701 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 TCRBV4S1A1TA0A5B7 111 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 IFNA1P01562 189 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 RHOBP62745 196 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 PMS2P11Q13670 270 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 SVBPQ8N300 66 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 C5orf56Q8N8D9 126 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 SH2D7A6NKC9 451 aaPredicted RBP11.53□□□□□ -0.56
LINC00299-202ENST00000442956 HSPB1P04792 205 aaKnown RBP11.53□□□□□ -0.56
LINC00299-202ENST00000442956 SPATA31B1PQ5VZV4 182 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 ATRAIDQ6UW56 229 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 RBMS3Q6XE24 437 aaKnown RBP11.53□□□□□ -0.56
LINC00299-202ENST00000442956 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 TTC9CQ8N5M4 171 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 TNFRSF19Q9NS68 423 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 MOB4Q9Y3A3 225 aa11.53□□□□□ -0.56
LINC00299-202ENST00000442956 K7EIM0 57 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 FAM78BQ5VT40 261 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 VAX2Q9UIW0 290 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 ZFHX3Q15911 3703 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 H3BUX3 64 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 TSPAN9O75954 239 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.57
LINC00299-202ENST00000442956 STAG3L2P0CL84 134 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 STAG3L3P0CL85 134 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 ARL14EPLP0DKL9 152 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 SELENOTP62341 195 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 OR5T1Q8NG75 326 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 FANCD2OSQ96PS1 177 aa11.52□□□□□ -0.57
LINC00299-202ENST00000442956 ITPR3Q14573 2671 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 ATP6V0E1O15342 81 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 CEBPGP53567 150 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 LY6EQ16553 131 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 SGMS2Q8NHU3 365 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 GATAD1Q8WUU5 269 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 TRGV9Q99603 122 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 HECTD1Q9ULT8 2610 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 IGLV11-55A0A075B6I3 123 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 PSMB3P49720 205 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 SOHLH1Q5JUK2 328 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 MIR17HGQ75NE6 70 aa11.51□□□□□ -0.57
LINC00299-202ENST00000442956 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms