RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 RBP4P02753 201 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 SSTR5P35346 364 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 GPX4P36969 197 aaPredicted RBP3.84□□□□□ -1.8
EDEM3-203ENST00000439962 PRCDQ00LT1 54 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 OR8G2PQ6IF36 304 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 TEPPQ6URK8 271 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF833PQ6ZTB9 187 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 C5orf24Q7Z6I8 188 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 OR51G1Q8NGK1 321 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 VSTM2AQ8TAG5 236 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM170AQ8WVE7 144 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 GPHA2Q96T91 129 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 QTRT1Q9BXR0 403 aaKnown RBP3.84□□□□□ -1.8
EDEM3-203ENST00000439962 PARLQ9H300 379 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 VSIRQ9H7M9 311 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM167BQ9NRX6 74 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM140Q9NV12 185 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 KAAG1Q9UBP8 84 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 RPUSD1Q9UJJ7 312 aaKnown RBP3.84□□□□□ -1.8
EDEM3-203ENST00000439962 TCF19Q9Y242 345 aa3.84□□□□□ -1.8
EDEM3-203ENST00000439962 PLXNB1O43157 2135 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 A0A1W2PN81 502 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 A0A1W2PPE3 182 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 A0A1W2PPV4 95 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 M0R1X1 148 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BKO60814 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 FCGR3BO75015 233 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 IGKV1D-33P01593 117 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 IGKV1-33P01594 117 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BJP06899 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 CXCL1P09341 107 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 OR10J4P0C629 311 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 OR9G9P0C7N8 305 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BOP23527 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BBP33778 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 CHRNA7P36544 502 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BDP58876 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BCP62807 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 RPL31P62899 125 aaKnown RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HNF4GQ14541 408 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST2H2BEQ16778 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 LRRC10Q5BKY1 277 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 TREML4Q6UXN2 200 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 SSX7Q7RTT5 188 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM183AQ8IXX5 376 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 ZFP82Q8N141 532 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 SLC24A4Q8NFF2 622 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BHQ93079 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 UHRF2Q96PU4 802 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BNQ99877 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H2BMQ99879 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 GGTLC1Q9BX51 225 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 ESM1Q9NQ30 184 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 MIOXQ9UGB7 285 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HILPDAQ9Y5L2 63 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 C11orf94C9JXX5 98 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PPP5D1E7EU14 171 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 UPK2O00526 184 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HOXA3O43365 443 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 TCF21O43680 179 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PROP1O75360 226 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 FABP1P07148 127 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 NPY1RP25929 384 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 COMPP49747 757 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 TAS2R45P59539 299 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PRR20EP86478 221 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PRR20CP86479 221 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PRR20DP86480 221 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PRR20BP86481 221 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PRR20AP86496 221 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 DEFB112Q30KQ8 113 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 AKIRIN2Q53H80 203 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM177Q53S58 311 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 KLF17Q5JT82 389 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PVRIGQ6DKI7 326 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 FAM53AQ6NSI3 398 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 VMO1Q7Z5L0 202 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM144Q7Z5S9 345 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 PDPNQ86YL7 162 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HIST3H2BBQ8N257 126 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 SMIM12Q96EX1 92 aa3.83□□□□□ -1.8
EDEM3-203ENST00000439962 HEYLQ9NQ87 328 aaPredicted RBP3.83□□□□□ -1.8
EDEM3-203ENST00000439962 TRAV20A0A0B4J274 112 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 A0A0U1RQK1 487 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 RBMXL2O75526 392 aaKnown RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 NXPH3O95157 252 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 GCGP01275 180 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 APOA2P02652 100 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 AKR1C3P42330 323 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 GALR1P47211 349 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 ELLP55199 621 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 MRPS11P82912 194 aaKnown RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 IZUMO4Q1ZYL8 232 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 ACTL10Q5JWF8 245 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 PQLC2Q6ZP29 291 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms