RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 BTNL8Q6UX41 500 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 ZNF600Q6ZNG1 722 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 LYZL2Q7Z4W2 148 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 SBSPONQ8IVN8 264 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 SLC24A4Q8NFF2 622 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 OR52B4Q8NGK2 314 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 OR1S1Q8NH92 325 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 RNASEH2CQ8TDP1 164 aaKnown RBP7.9□□□□□ -1.14
MCF2L-216ENST00000439475 CACNG8Q8WXS5 425 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 WDR89Q96FK6 387 aaPredicted RBP7.9□□□□□ -1.14
MCF2L-216ENST00000439475 WWC2-AS2Q96NR7 200 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 C19orf73Q9NVV2 129 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 MLXQ9UH92 298 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 TMED3Q9Y3Q3 217 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 U3KQ87 197 aa7.9□□□□□ -1.14
MCF2L-216ENST00000439475 PRKDCP78527 4128 aaKnown RBP7.89□□□□□ -1.15
MCF2L-216ENST00000439475 LINC00854A0A1B0GVQ3 168 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 OR11H12B2RN74 326 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 CLN5O75503 358 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 MED6O75586 246 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 SCAF4O95104 1147 aaKnown RBP7.89□□□□□ -1.15
MCF2L-216ENST00000439475 IFNA10P01566 189 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 IGHV3-48P01763 117 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 CD5P06127 495 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 SLC25A4P12235 298 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 EDN2P20800 178 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 ADMP35318 185 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 NMSQ5H8A3 153 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 LINC00299Q6ZSB3 139 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 TMEM61Q8N0U2 210 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 LRTM2Q8N967 370 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 OR4X1Q8NH49 305 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 SPAG8Q99932 426 aaPredicted RBP7.89□□□□□ -1.15
MCF2L-216ENST00000439475 PRR13Q9NZ81 148 aa7.89□□□□□ -1.15
MCF2L-216ENST00000439475 DNAH3Q8TD57 4116 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 A0A1W2PS18 150 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 TSPAN4O14817 238 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 ZNF207O43670 478 aaKnown RBP7.88□□□□□ -1.15
MCF2L-216ENST00000439475 NDUFB6O95139 128 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 NXPH3O95157 252 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 CD7P09564 240 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 SLC25A6P12236 298 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 NPY1RP25929 384 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 CMC4P56277 68 aaPredicted RBP7.88□□□□□ -1.15
MCF2L-216ENST00000439475 RAB11AP62491 216 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 PAFAH1B2P68402 229 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 RPP30P78346 268 aaKnown RBP7.88□□□□□ -1.15
MCF2L-216ENST00000439475 TNFRSF9Q07011 255 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 BSXQ3C1V8 233 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 TMEM116Q8NCL8 245 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 COQ8AQ8NI60 647 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 DTD1Q8TEA8 209 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 Q8WTZ3 238 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 NARS2Q96I59 477 aaKnown RBP7.88□□□□□ -1.15
MCF2L-216ENST00000439475 TMEM231Q9H6L2 316 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 HSPB7Q9UBY9 170 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 SMPXQ9UHP9 88 aa7.88□□□□□ -1.15
MCF2L-216ENST00000439475 IGHV7-4-1A0A0J9YVY3 117 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 OR4C46A6NHA9 309 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 FAM90A26D6RGX4 464 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 IFNA21P01568 189 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 IFNA4P05014 189 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 IL7P13232 177 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 PPP1R1AQ13522 171 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 MLANAQ16655 118 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 TOMM20LQ6UXN7 152 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 DEFB125Q8N687 156 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 OR10C1Q96KK4 312 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 RCHY1Q96PM5 261 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 CIB3Q96Q77 187 aaPredicted RBP7.87□□□□□ -1.15
MCF2L-216ENST00000439475 SPATA25Q9BR10 227 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 RHPN1-AS1Q9BWJ2 59 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 RBKSQ9H477 322 aa7.87□□□□□ -1.15
MCF2L-216ENST00000439475 PUS1Q9Y606 427 aaKnown RBP eCLIP7.87□□□□□ -1.15
MCF2L-216ENST00000439475 IGHV3OR16-8A0A075B7F1 116 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 HOXB5P09067 269 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 NPPCP23582 126 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 C4orf46Q504U0 113 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 OR1S2Q8NGQ3 325 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 S100ZQ8WXG8 99 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 SDHCQ99643 169 aaPredicted RBP7.86□□□□□ -1.15
MCF2L-216ENST00000439475 TM2D3Q9BRN9 247 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 CCDC32Q9BV29 185 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 FNDC4Q9H6D8 234 aaPredicted RBP7.86□□□□□ -1.15
MCF2L-216ENST00000439475 SRD5A3Q9H8P0 318 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 SELENOKQ9Y6D0 94 aa7.86□□□□□ -1.15
MCF2L-216ENST00000439475 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 CHEK1O14757 476 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 PITX3O75364 302 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 OR4E1P0C645 316 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 GPX4P36969 197 aaPredicted RBP7.85□□□□□ -1.15
MCF2L-216ENST00000439475 HAGHQ16775 308 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 LYG2Q86SG7 212 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 GRAMD2BQ96HH9 432 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 METTL26Q96S19 204 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 DNAH9Q9NYC9 4486 aa7.85□□□□□ -1.15
MCF2L-216ENST00000439475 LOC102724200A0A096LPH7 203 aaPredicted RBP7.84□□□□□ -1.15
MCF2L-216ENST00000439475 IGHV3-49A0A0A0MS15 119 aa7.84□□□□□ -1.15
MCF2L-216ENST00000439475 WRBO00258 174 aa7.84□□□□□ -1.15
MCF2L-216ENST00000439475 LYRM1O43325 122 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms