RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CYP2R1Q6VVX0 501 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 OR8J1Q8NGP2 316 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 OR1P1Q8NH06 330 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 SIKE1Q9BRV8 207 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 WDR12Q9GZL7 423 aaKnown RBP7.04□□□□□ -1.28
RTN4-211ENST00000438462 EFCAB1Q9HAE3 211 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 NDUFA4L2Q9NRX3 87 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 DOK5Q9P104 306 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 SPATA2Q9UM82 520 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 RBMX2Q9Y388 322 aaKnown RBP7.04□□□□□ -1.28
RTN4-211ENST00000438462 KIF25-AS1Q9Y6Z4 181 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 SSPOA2VEC9 5147 aa7.04□□□□□ -1.28
RTN4-211ENST00000438462 UCP1P25874 307 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 NPBWR1P48145 328 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 PSMB3P49720 205 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 ZNF415Q09FC8 603 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 SSX1Q16384 188 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 C12orf73Q69YU5 71 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 ZNF493Q6ZR52 646 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 OR11H7Q8NGC8 314 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 OR1L8Q8NGR8 309 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 GINS4Q9BRT9 223 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 DCSTAMPQ9H295 470 aa7.03□□□□□ -1.28
RTN4-211ENST00000438462 ALPLP05186 524 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 HNRNPCP07910 306 aaKnown RBP eCLIP7.02□□□□□ -1.29
RTN4-211ENST00000438462 CD37P11049 281 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 HSD17B1P14061 328 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 ETV6P41212 452 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 TMEM203Q969S6 136 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 TMEM230Q96A57 120 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 TMEM59Q9BXS4 323 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 MAGIXQ9H6Y5 334 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 TMEM140Q9NV12 185 aa7.02□□□□□ -1.29
RTN4-211ENST00000438462 A0A0A6YYD4 124 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 A0A0B4J293 547 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 IGHV3-38A0A0C4DH36 116 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 ZNF324O75467 553 aaPredicted RBP7.01□□□□□ -1.29
RTN4-211ENST00000438462 TMEM50AO95807 157 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 IGLV2-14P01704 120 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 ID1P41134 155 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 CLDN12P56749 244 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 MRPL23Q16540 153 aaKnown RBP7.01□□□□□ -1.29
RTN4-211ENST00000438462 LINC01556Q5JQF7 62 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 Q6ZTI0 123 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 H1FOOQ8IZA3 346 aaPredicted RBP7.01□□□□□ -1.29
RTN4-211ENST00000438462 TMEM256Q8N2U0 113 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 THAP8Q8NA92 274 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 GPR146Q96CH1 333 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 NRBF2Q96F24 287 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 KCNK15Q9H427 330 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 TAS2R8Q9NYW2 309 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 CKLFQ9UBR5 152 aa7.01□□□□□ -1.29
RTN4-211ENST00000438462 J3QRE1 110 aa7□□□□□ -1.29
RTN4-211ENST00000438462 SOCS3O14543 225 aa7□□□□□ -1.29
RTN4-211ENST00000438462 PHOX2AO14813 284 aa7□□□□□ -1.29
RTN4-211ENST00000438462 FGF2P09038 288 aa7□□□□□ -1.29
RTN4-211ENST00000438462 DCKP27707 260 aa7□□□□□ -1.29
RTN4-211ENST00000438462 EIF4EBP1Q13541 118 aaPredicted RBP7□□□□□ -1.29
RTN4-211ENST00000438462 SMN1Q16637 294 aaKnown RBP7□□□□□ -1.29
RTN4-211ENST00000438462 SFXN4Q6P4A7 337 aa7□□□□□ -1.29
RTN4-211ENST00000438462 GPR141Q7Z602 305 aa7□□□□□ -1.29
RTN4-211ENST00000438462 Q8N976 141 aa7□□□□□ -1.29
RTN4-211ENST00000438462 OR52E5Q8NH55 327 aa7□□□□□ -1.29
RTN4-211ENST00000438462 HSD17B10Q99714 261 aaKnown RBP7□□□□□ -1.29
RTN4-211ENST00000438462 CMSS1Q9BQ75 279 aaKnown RBP7□□□□□ -1.29
RTN4-211ENST00000438462 TRGV2A0A075B6R0 118 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 TCRBV5S2A0A599 114 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 FAM107AO95990 144 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 GTF2A1P52655 376 aaPredicted RBP6.99□□□□□ -1.29
RTN4-211ENST00000438462 TMED1Q13445 227 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 MAFIPQ8WZ33 124 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 AIFM2Q9BRQ8 373 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 ARL2BPQ9Y2Y0 163 aa6.99□□□□□ -1.29
RTN4-211ENST00000438462 RNF222A6NCQ9 220 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 TMEM235A6NFC5 223 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 ZAR1LA6NP61 321 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 SNURFLB1AK76 121 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 EDF1O60869 148 aaKnown RBP6.98□□□□□ -1.29
RTN4-211ENST00000438462 DIRAS3O95661 229 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 SRIP30626 198 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 CNN1P51911 297 aaKnown RBP6.98□□□□□ -1.29
RTN4-211ENST00000438462 TAS2R31P59538 309 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 POU2AF1Q16633 256 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 CROCCP2Q86T23 111 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 SYS1Q8N2H4 156 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 ACBD7Q8N6N7 88 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 DMBX1Q8NFW5 382 aa6.98□□□□□ -1.29
RTN4-211ENST00000438462 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
RTN4-211ENST00000438462 TRAV26-2A0A0B4J265 109 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 GNGT2O14610 69 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 BUB3O43684 328 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 PRAF2O60831 178 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 IGHV3-30P01768 117 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 IGHV3-30-5P0DP03 117 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 LAGE3Q14657 143 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 LHFPL3Q86UP9 236 aa6.97□□□□□ -1.29
RTN4-211ENST00000438462 ADGRG5Q8IZF4 528 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms