RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ARL2-SNX15V9GYD0 113 aa12.22□□□□□ -0.45
SGCE-205ENST00000437425 IGKV1OR2-108A0A075B7D4 117 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 REG1AP05451 166 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 BTN1A1Q13410 526 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 RHEBQ15382 184 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 FAM74A3Q4VXF1 159 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 WNT10AQ9GZT5 417 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 C7orf69Q9H7B7 122 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 TECRQ9NZ01 308 aaKnown RBP12.21□□□□□ -0.45
SGCE-205ENST00000437425 THYN1Q9P016 225 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 FUT9Q9Y231 359 aa12.21□□□□□ -0.45
SGCE-205ENST00000437425 ELOA3CA0A087WX78 387 aaPredicted RBP12.21□□□□□ -0.46
SGCE-205ENST00000437425 PDE6DO43924 150 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 CLN5O75503 358 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 OR5G3P0C626 314 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 RND2P52198 227 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 CX3CL1P78423 397 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 LOXL1Q08397 574 aaPredicted RBP12.21□□□□□ -0.46
SGCE-205ENST00000437425 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.46
SGCE-205ENST00000437425 MLANAQ16655 118 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 DEFB113Q30KQ7 82 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 PQLC2Q6ZP29 291 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 LURAP1LQ8IV03 231 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 TTC9CQ8N5M4 171 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 C17orf50Q8WW18 174 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 MBD6Q96DN6 1003 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 NIPSNAP3BQ9BS92 247 aa12.21□□□□□ -0.46
SGCE-205ENST00000437425 CD24P25063 80 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 GCSAMLQ5JQS6 135 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 ATRAIDQ6UW56 229 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 PRSS57Q6UWY2 283 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 IQCF2Q8IXL9 164 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 CYB561D1Q8N8Q1 229 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 Q8N9W7 124 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 OR4X1Q8NH49 305 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 SLC25A33Q9BSK2 321 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 DNAJC4Q9NNZ3 241 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 TMEM167BQ9NRX6 74 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 TNFRSF19Q9NS68 423 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 HIF1ANQ9NWT6 349 aa12.2□□□□□ -0.46
SGCE-205ENST00000437425 TRAV40A0A0B4J280 105 aa12.19□□□□□ -0.46
SGCE-205ENST00000437425 HMGB3O15347 200 aaKnown RBP12.19□□□□□ -0.46
SGCE-205ENST00000437425 SCGB2A1O75556 95 aa12.19□□□□□ -0.46
SGCE-205ENST00000437425 HIST1H1BP16401 226 aaKnown RBP12.19□□□□□ -0.46
SGCE-205ENST00000437425 MFAP2P55001 183 aa12.19□□□□□ -0.46
SGCE-205ENST00000437425 FAM78BQ5VT40 261 aa12.19□□□□□ -0.46
SGCE-205ENST00000437425 NRGNQ92686 78 aa12.19□□□□□ -0.46
SGCE-205ENST00000437425 TRAV30A0A087WSZ9 112 aa12.18□□□□□ -0.46
SGCE-205ENST00000437425 B4DEV8 164 aa12.18□□□□□ -0.46
SGCE-205ENST00000437425 F6UZH7 168 aa12.18□□□□□ -0.46
SGCE-205ENST00000437425 I3L2K1 104 aa12.18□□□□□ -0.46
SGCE-205ENST00000437425 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
SGCE-205ENST00000437425 TVP23CQ96ET8 276 aa12.18□□□□□ -0.46
SGCE-205ENST00000437425 SEPSECSQ9HD40 501 aaKnown RBP12.18□□□□□ -0.46
SGCE-205ENST00000437425 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
SGCE-205ENST00000437425 IGKV1D-37A0A075B6S9 117 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 M0R036 132 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 COX7A2P2O60397 106 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 GCHFRP30047 84 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 NPBWR1P48145 328 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 PLP1P60201 277 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 S100A7AQ86SG5 101 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 STXBP6Q8NFX7 210 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 ZNF48Q96MX3 618 aaPredicted RBP12.17□□□□□ -0.46
SGCE-205ENST00000437425 RBM14Q96PK6 669 aaKnown RBP12.17□□□□□ -0.46
SGCE-205ENST00000437425 TMPRSS5Q9H3S3 457 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 SMCO4Q9NRQ5 59 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 MOB4Q9Y3A3 225 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 AKAP6Q13023 2319 aa12.17□□□□□ -0.46
SGCE-205ENST00000437425 NBPF19A0A087WUL8 3843 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 A0A096LNT2 108 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 C11orf94C9JXX5 98 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 H3BQ15 152 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 M0QZK8 103 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 DNASE2O00115 360 aaPredicted RBP12.16□□□□□ -0.46
SGCE-205ENST00000437425 PAGE4O60829 102 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 CD81P60033 236 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 KLK9Q2XQG4 91 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 FAM120AOSQ5T036 256 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 C10orf113Q5VZT2 155 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 TUBA4BQ9H853 241 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 PITPNC1Q9UKF7 332 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 KLK9Q9UKQ9 250 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 IGLV11-55A0A075B6I3 123 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 PSMB11A5LHX3 300 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 APELAP0DMC3 54 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 PAX6P26367 422 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 CEBPGP53567 150 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 FAM90A2PQ658T7 463 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 C16orf82Q7Z2V1 217 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 OR4F5Q8NH21 305 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 OR4F4Q96R69 305 aa12.16□□□□□ -0.46
SGCE-205ENST00000437425 PUS1Q9Y606 427 aaKnown RBP eCLIP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms