RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 CST9LQ9H4G1 147 aa10.15□□□□□ -0.78
TMEM116-202ENST00000437003 PLEKHA3Q9HB20 300 aa10.15□□□□□ -0.78
TMEM116-202ENST00000437003 LY96Q9Y6Y9 160 aa10.15□□□□□ -0.78
TMEM116-202ENST00000437003 CA7P43166 264 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 MFAP2P55001 183 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 UBE2G1P62253 170 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 SRSF6Q13247 344 aaKnown RBP10.14□□□□□ -0.79
TMEM116-202ENST00000437003 OR4A47Q6IF82 309 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 SPACA3Q8IXA5 215 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 LINC00479Q96M42 142 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 HES4Q9HCC6 221 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 OSTCQ9NRP0 149 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 LSM4Q9Y4Z0 139 aaKnown RBP10.14□□□□□ -0.79
TMEM116-202ENST00000437003 EP300Q09472 2414 aaPredicted RBP10.14□□□□□ -0.79
TMEM116-202ENST00000437003 TRAV30A0A087WSZ9 112 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 GGTLC3B5MD39 225 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 NUDT3O95989 172 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 VDAC2P45880 294 aaPredicted RBP10.14□□□□□ -0.79
TMEM116-202ENST00000437003 GPR12P47775 334 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 CAMPP49913 170 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 SLC35E4Q6ICL7 350 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 ZC2HC1AQ96GY0 325 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 OR8B2Q96RD0 313 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 GNG12Q9UBI6 72 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 SELENOKQ9Y6D0 94 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 ARL2-SNX15V9GYD0 113 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 M0R1X1 148 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 PROP1O75360 226 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 REG1AP05451 166 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 OCIAD2Q56VL3 154 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 RPL39P5Q59GN2 51 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 MOB3BQ86TA1 216 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 ZNF355PQ9NSJ1 428 aa10.14□□□□□ -0.79
TMEM116-202ENST00000437003 H0YJW9 148 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 SAP30O75446 220 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 IGKV3-15P01624 115 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 IGHG3P01860 377 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 MYOD1P15172 320 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 AREGP15514 252 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 KIR2DL2P43627 348 aaPredicted RBP10.13□□□□□ -0.79
TMEM116-202ENST00000437003 PNKDQ8N490 385 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 CXXC4Q9H2H0 198 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 TCF19Q9Y242 345 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 CNOT1A5YKK6 2376 aaKnown RBP10.13□□□□□ -0.79
TMEM116-202ENST00000437003 IGHV3OR15-7A0A075B7D8 119 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 hDV102S1A0JD36 115 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 IGLV2-8P01709 118 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 DUTP33316 252 aaKnown RBP10.13□□□□□ -0.79
TMEM116-202ENST00000437003 GDF5OSQ5U4N7 250 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 AMMECR1LQ6DCA0 310 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 PRR27Q6MZM9 219 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 LRRC29Q8WV35 223 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 DUSP13Q9UII6 198 aa10.13□□□□□ -0.79
TMEM116-202ENST00000437003 DCHS1Q96JQ0 3298 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 MUC21A0A0G2JKD1 596 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 MUC21A0A140T8X8 626 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 SMIM27A0A1W2PRY6 76 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 ISLRO14498 428 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 TAX1BP3O14907 124 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 CECR9P0C854 216 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 LINC00869P0C866 280 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 ERVK-16P61578 105 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 RAB31Q13636 194 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 SMIM21Q3B7S5 101 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 MUC21Q5SSG8 566 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 WDR31Q8NA23 367 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 C9orf106Q8NAJ2 232 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 OR2Z1Q8NG97 314 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 OR8B3Q8NGG8 313 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 OR52E5Q8NH55 327 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 OR2T6Q8NHC8 308 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 LEAP2Q969E1 77 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 VCX2Q9H322 139 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 TNFRSF19Q9NS68 423 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 CEP250Q9BV73 2442 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 SMG1Q96Q15 3661 aaKnown RBP10.12□□□□□ -0.79
TMEM116-202ENST00000437003 CACNA1HO95180 2353 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 IZUMO1RA6ND01 250 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 C2orf70A6NJV1 201 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 SPINT2O43291 252 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 CD24P25063 80 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 NPY1RP25929 384 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 CEACAM3P40198 252 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 COX19Q49B96 90 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 CD177Q8N6Q3 437 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 NABP2Q9BQ15 211 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 MCRIP2Q9BUT9 160 aaKnown RBP10.12□□□□□ -0.79
TMEM116-202ENST00000437003 PGPEP1Q9NXJ5 209 aa10.12□□□□□ -0.79
TMEM116-202ENST00000437003 MRPL27Q9P0M9 148 aaKnown RBP10.12□□□□□ -0.79
TMEM116-202ENST00000437003 OR4C46A6NHA9 309 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 GUSBP1Q15486 140 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 TBR1Q16650 682 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 LRRC10Q5BKY1 277 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 LINC00173Q6ZV60 143 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 GLMPQ8WWB7 406 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 ZNF503Q96F45 646 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 ABCA1O95477 2261 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 TMPRSS3P57727 454 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 PET117Q6UWS5 81 aa10.11□□□□□ -0.79
TMEM116-202ENST00000437003 TIMM8BQ9Y5J9 83 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms