RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NDUFB8O95169 186 aa17.96■□□□□ 0.47
CPSF4-204ENST00000436336 IGHG4P01861 327 aa17.96■□□□□ 0.47
CPSF4-204ENST00000436336 RHOGP84095 191 aa17.96■□□□□ 0.47
CPSF4-204ENST00000436336 TMEM144Q7Z5S9 345 aa17.96■□□□□ 0.47
CPSF4-204ENST00000436336 SCARB1Q8WTV0 552 aa17.96■□□□□ 0.47
CPSF4-204ENST00000436336 MS4A10Q96PG2 267 aa17.96■□□□□ 0.47
CPSF4-204ENST00000436336 SLA2Q9H6Q3 261 aa17.96■□□□□ 0.47
CPSF4-204ENST00000436336 IGHV3-21A0A0B4J1V1 117 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 TMEM89A2RUT3 159 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 IGHV3-48P01763 117 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 TMEM116Q8NCL8 245 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 TAF15Q92804 592 aaKnown RBP eCLIP17.95■□□□□ 0.46
CPSF4-204ENST00000436336 ACY3Q96HD9 319 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 GINS3Q9BRX5 216 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 C16orf95Q9H693 158 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 PSMB11A5LHX3 300 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 FAM223BA6NKX1 122 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 MPDU1O75352 247 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 TRGV3P03979 118 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 FGF7P21781 194 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 TEPPQ6URK8 271 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 ZNF329Q86UD4 541 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 FAM223AQ8IWN6 122 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 HSD17B11Q8NBQ5 300 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 VN1R17PQ8TDU5 208 aa17.95■□□□□ 0.46
CPSF4-204ENST00000436336 MRPL36Q9P0J6 103 aaKnown RBP17.95■□□□□ 0.46
CPSF4-204ENST00000436336 PF4V1P10720 104 aa17.94■□□□□ 0.46
CPSF4-204ENST00000436336 RND2P52198 227 aa17.94■□□□□ 0.46
CPSF4-204ENST00000436336 ACSM6Q6P461 480 aa17.94■□□□□ 0.46
CPSF4-204ENST00000436336 BTNL8Q6UX41 500 aa17.94■□□□□ 0.46
CPSF4-204ENST00000436336 CXorf58Q96LI9 332 aa17.94■□□□□ 0.46
CPSF4-204ENST00000436336 LSM4Q9Y4Z0 139 aaKnown RBP17.94■□□□□ 0.46
CPSF4-204ENST00000436336 NDUFA7O95182 113 aa17.93■□□□□ 0.46
CPSF4-204ENST00000436336 TPPP2P59282 170 aa17.93■□□□□ 0.46
CPSF4-204ENST00000436336 DEFA5Q01523 94 aa17.93■□□□□ 0.46
CPSF4-204ENST00000436336 C15orf32Q32M92 178 aa17.93■□□□□ 0.46
CPSF4-204ENST00000436336 CENPVQ7Z7K6 275 aaPredicted RBP17.93■□□□□ 0.46
CPSF4-204ENST00000436336 OR4X1Q8NH49 305 aa17.93■□□□□ 0.46
CPSF4-204ENST00000436336 NPIPB3Q92617 1050 aa17.93■□□□□ 0.46
CPSF4-204ENST00000436336 MFSD2BA6NFX1 497 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 ATP6V0CP27449 155 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 PSMB8P28062 276 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 TEX38Q6PEX7 206 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 GNPNAT1Q96EK6 184 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-204ENST00000436336 C21orf62Q9NYP8 219 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 RAB9AP51151 201 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 MFAP4P55083 255 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 RUNX1Q01196 453 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 TEX261Q6UWH6 196 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 THAP8Q8NA92 274 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 PHYHIPLQ96FC7 376 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 USMG5Q96IX5 58 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 NPCDR1Q9BY65 106 aa17.92■□□□□ 0.46
CPSF4-204ENST00000436336 MAST4O15021 2626 aa17.91■□□□□ 0.46
CPSF4-204ENST00000436336 IGKV1OR2-108A0A075B7D4 117 aa17.91■□□□□ 0.46
CPSF4-204ENST00000436336 CFDP00746 253 aaPredicted RBP17.91■□□□□ 0.46
CPSF4-204ENST00000436336 ELANEP08246 267 aa17.91■□□□□ 0.46
CPSF4-204ENST00000436336 ATP5G2Q06055 141 aa17.91■□□□□ 0.46
CPSF4-204ENST00000436336 RAB31Q13636 194 aa17.91■□□□□ 0.46
CPSF4-204ENST00000436336 TXN2Q99757 166 aa17.91■□□□□ 0.46
CPSF4-204ENST00000436336 KLK15Q9H2R5 256 aa17.91■□□□□ 0.46
CPSF4-204ENST00000436336 CLN5O75503 358 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 SPP1P10451 314 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 FCGR2BP31994 310 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-204ENST00000436336 NPBWR1P48145 328 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 IFITM2Q01629 132 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 FOXE3Q13461 319 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 EIF5AL1Q6IS14 154 aaKnown RBP17.9■□□□□ 0.46
CPSF4-204ENST00000436336 C10orf99Q6UWK7 81 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 COMMD1Q8N668 190 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 LINC01006Q8NI28 216 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 EEF1AKMT3Q96AZ1 226 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 MGST2Q99735 147 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 PSMG3Q9BT73 122 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-204ENST00000436336 RSG1Q9BU20 258 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 TIMM9Q9Y5J7 89 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 S4R3C0 116 aa17.9■□□□□ 0.46
CPSF4-204ENST00000436336 C17orf112F2Z3M2 114 aa17.89■□□□□ 0.46
CPSF4-204ENST00000436336 SEC11BP0C7V7 166 aa17.89■□□□□ 0.46
CPSF4-204ENST00000436336 CAMLGP49069 296 aa17.89■□□□□ 0.46
CPSF4-204ENST00000436336 ZNF709Q8N972 641 aa17.89■□□□□ 0.46
CPSF4-204ENST00000436336 ZNF502Q8TBZ5 544 aa17.89■□□□□ 0.46
CPSF4-204ENST00000436336 SH3BGRL3Q9H299 93 aa17.89■□□□□ 0.46
CPSF4-204ENST00000436336 SLC25A32Q9H2D1 315 aa17.89■□□□□ 0.46
CPSF4-204ENST00000436336 A0A0G2JLM5 398 aa17.89■□□□□ 0.45
CPSF4-204ENST00000436336 ZFP92A6NM28 416 aa17.89■□□□□ 0.45
CPSF4-204ENST00000436336 AGPAT2O15120 278 aa17.89■□□□□ 0.45
CPSF4-204ENST00000436336 KLHDC1Q8N7A1 406 aa17.89■□□□□ 0.45
CPSF4-204ENST00000436336 OR4F5Q8NH21 305 aa17.89■□□□□ 0.45
CPSF4-204ENST00000436336 IGKV1D-37A0A075B6S9 117 aa17.88■□□□□ 0.45
CPSF4-204ENST00000436336 TRBV7-1A0A0A6YYK4 115 aa17.88■□□□□ 0.45
CPSF4-204ENST00000436336 Q56UQ5 140 aa17.88■□□□□ 0.45
CPSF4-204ENST00000436336 RNF152Q8N8N0 203 aa17.88■□□□□ 0.45
CPSF4-204ENST00000436336 ZNF680Q8NEM1 530 aa17.88■□□□□ 0.45
CPSF4-204ENST00000436336 ATP6V0BQ99437 205 aa17.88■□□□□ 0.45
CPSF4-204ENST00000436336 GGTLC1Q9BX51 225 aa17.88■□□□□ 0.45
CPSF4-204ENST00000436336 NF1P21359 2839 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 TRAV30A0A087WSZ9 112 aa17.87■□□□□ 0.45
CPSF4-204ENST00000436336 F8W735 103 aaPredicted RBP17.87■□□□□ 0.45
CPSF4-204ENST00000436336 GNG7O60262 68 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms