RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 C1QTNF4Q9BXJ3 329 aa12.87□□□□□ -0.35
NEDD4-202ENST00000435532 ASXL3Q9C0F0 2248 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 TRGV4A0A0C4DH28 118 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 IGHV2-70DA0A0C4DH43 119 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 CGAP01215 116 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 ZNF383Q8NA42 475 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 LRTM2Q8N967 370 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 LINC00862A6NCI5 91 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 RAMP3O60896 148 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 CD7P09564 240 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 RPRMLQ8N4K4 120 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
NEDD4-202ENST00000435532 ETV2O00321 342 aaPredicted RBP12.86□□□□□ -0.35
NEDD4-202ENST00000435532 NAT1P18440 290 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 UQCRFS1P47985 274 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 PSMG4Q5JS54 123 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 MEIG1Q5JSS6 88 aa12.86□□□□□ -0.35
NEDD4-202ENST00000435532 LY6HO94772 140 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 TDGF1P13385 188 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 SHISA3A0PJX4 238 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 PRR32B1ATL7 298 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 H2BFSP57053 126 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 SUMO2P61956 95 aaKnown RBP12.85□□□□□ -0.35
NEDD4-202ENST00000435532 H0YJW9 148 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 TMEM250H0YL14 139 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 HBBP68871 147 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 SLX1AQ9BQ83 275 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 IGKV1D-17A0A075B6S4 117 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 IFITM10A6NMD0 228 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 RAB37Q96AX2 223 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 TRAF4Q9BUZ4 470 aaPredicted RBP12.85□□□□□ -0.35
NEDD4-202ENST00000435532 RALGAPA1Q6GYQ0 2036 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 TRBV6-6A0A0A6YYG2 114 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 PSPNO60542 156 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 MIR17HGQ75NE6 70 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 VGLL1Q99990 258 aa12.85□□□□□ -0.35
NEDD4-202ENST00000435532 FABP5P3A8MUU1 101 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 BEND2Q8NDZ0 799 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 SRSF8Q9BRL6 282 aaKnown RBP12.84□□□□□ -0.35
NEDD4-202ENST00000435532 PARLQ9H300 379 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 CACNA1EQ15878 2313 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 TMEM238LA0A1B0GVL6 79 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 A6NJY4 79 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 GATA4P43694 442 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 SNRPEP62304 92 aaKnown RBP12.84□□□□□ -0.35
NEDD4-202ENST00000435532 SFRP2Q96HF1 295 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 SOX21Q9Y651 276 aaPredicted RBP12.84□□□□□ -0.35
NEDD4-202ENST00000435532 IGKV1-27A0A075B6S5 117 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 OR11H12B2RN74 326 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 VENTXO95231 258 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 CRPP02741 224 aa12.84□□□□□ -0.35
NEDD4-202ENST00000435532 MPZP25189 248 aa12.83□□□□□ -0.35
NEDD4-202ENST00000435532 TAS2R60P59551 318 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 GLMPQ8WWB7 406 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 NUP210Q8TEM1 1887 aaPredicted RBP12.83□□□□□ -0.36
NEDD4-202ENST00000435532 PET117Q6UWS5 81 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 OR10AG1Q8NH19 301 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 RCC1LQ96I51 464 aaKnown RBP12.83□□□□□ -0.36
NEDD4-202ENST00000435532 PEF1Q9UBV8 284 aaKnown RBP12.83□□□□□ -0.36
NEDD4-202ENST00000435532 TRAV34A0A0B4J273 112 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 REC114Q7Z4M0 266 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 CACNG7P62955 275 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 Q6P435 159 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 CFAP161Q6P656 301 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 FER1L6-AS1Q8NA97 138 aa12.83□□□□□ -0.36
NEDD4-202ENST00000435532 MRPL18Q9H0U6 180 aaKnown RBP12.83□□□□□ -0.36
NEDD4-202ENST00000435532 A0A0A6YYD4 124 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 A6NDN8 102 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 H3BRM9 83 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 GTF2H5Q6ZYL4 71 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 PROK2Q9HC23 129 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 C11orf91Q3C1V1 193 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 KLHDC3Q9BQ90 382 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 FAM215AQ9Y5M1 114 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 IFITM3Q01628 133 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 PRADC1Q9BSG0 188 aa12.82□□□□□ -0.36
NEDD4-202ENST00000435532 RPP21Q9H633 154 aaKnown RBP12.82□□□□□ -0.36
NEDD4-202ENST00000435532 A0A1B0GWJ7 208 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 OTX1P32242 354 aaPredicted RBP12.81□□□□□ -0.36
NEDD4-202ENST00000435532 DEFB113Q30KQ7 82 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 IGFL2Q6UWQ7 119 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 COX6CP09669 75 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 GATA2P23769 480 aaPredicted RBP12.81□□□□□ -0.36
NEDD4-202ENST00000435532 ZNF506Q5JVG8 444 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 DMRTC2Q8IXT2 367 aaPredicted RBP12.81□□□□□ -0.36
NEDD4-202ENST00000435532 CD55P08174 381 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 NMUP48645 174 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 RARRES2Q99969 163 aa12.81□□□□□ -0.36
NEDD4-202ENST00000435532 ARHGEF17Q96PE2 2063 aaPredicted RBP12.81□□□□□ -0.36
NEDD4-202ENST00000435532 CFHR2P36980 270 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 LCN12Q6JVE5 192 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 NLRC5Q86WI3 1866 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 HINT1P49773 126 aaPredicted RBP12.8□□□□□ -0.36
NEDD4-202ENST00000435532 KIR3DL3Q8N743 410 aa12.8□□□□□ -0.36
NEDD4-202ENST00000435532 ITGB1BP1O14713 200 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms