RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CLPSP04118 112 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 RNASE3P12724 160 aaKnown RBP0.57□□□□□ -2.32
CDC40-204ENST00000431461 CASP1P29466 404 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 RPL5P46777 297 aaKnown RBP0.57□□□□□ -2.32
CDC40-204ENST00000431461 ALKAL1Q6UXT8 129 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 TRAPPC5Q8IUR0 188 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 LINC00311Q8N616 119 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 TMEM86BQ8N661 226 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 CLDN22Q8N7P3 220 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 SIGLECL1Q8N7X8 197 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 OR5A1Q8NGJ0 315 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 SFT2D1Q8WV19 159 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 DNAJC9Q8WXX5 260 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 BTF3L4Q96K17 158 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 CCDC42Q96M95 316 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 LINC00467Q9BRT7 94 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 OSTCQ9NRP0 149 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 MRPL27Q9P0M9 148 aaKnown RBP0.57□□□□□ -2.32
CDC40-204ENST00000431461 FREM1Q5H8C1 2179 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 SDK1Q7Z5N4 2213 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 KIF24Q5T7B8 1368 aa0.57□□□□□ -2.32
CDC40-204ENST00000431461 ZFHX2Q9C0A1 2572 aaPredicted RBP0.56□□□□□ -2.32
CDC40-204ENST00000431461 INTS1Q8N201 2190 aaKnown RBP0.56□□□□□ -2.32
CDC40-204ENST00000431461 MED13Q9UHV7 2174 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 PLB1Q6P1J6 1458 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 NEO1Q92859 1461 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 TRAV26-2A0A0B4J265 109 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 CHP2O43745 196 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 IGKV1-5P01602 117 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 CTSDP07339 412 aaPredicted RBP0.56□□□□□ -2.32
CDC40-204ENST00000431461 KRTAP10-4P60372 401 aaPredicted RBP0.56□□□□□ -2.32
CDC40-204ENST00000431461 TMEM97Q5BJF2 176 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 LYRM7Q5U5X0 104 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 C8orf74Q6P047 294 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 Q6ZQT0 140 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 BPIFA4PQ86YQ2 179 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 Q8N814 137 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 GDPD1Q8N9F7 314 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 OR51D1Q8NGF3 324 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 OR5B17Q8NGF7 314 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 C14orf132Q9NPU4 83 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 ACER3Q9NUN7 267 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 TVP23BQ9NYZ1 205 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 ALPK2Q86TB3 2170 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 ADCY9O60503 1353 aa0.56□□□□□ -2.32
CDC40-204ENST00000431461 KDM6AO15550 1401 aaPredicted RBP0.55□□□□□ -2.32
CDC40-204ENST00000431461 MAST2Q6P0Q8 1798 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 CUL9Q8IWT3 2517 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 A0A087X0T9 212 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 TRBV6-7A0A0A0MS04 114 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 FAAHO00519 579 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 INE1O15225 51 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 OR2T1O43869 369 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 C8GP07360 202 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 OR4E1P0C645 316 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 GDF5OSQ5U4N7 250 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 CLVS1Q8IUQ0 354 aaPredicted RBP0.55□□□□□ -2.32
CDC40-204ENST00000431461 OR13D1Q8NGV5 346 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 OR10J5Q8NHC4 309 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 ZNF418Q8TF45 676 aaPredicted RBP0.55□□□□□ -2.32
CDC40-204ENST00000431461 FAM172AQ8WUF8 416 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 GPR146Q96CH1 333 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 C8orf76Q96K31 380 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 PPP1R2P1Q96PQ5 205 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 YPEL2Q96QA6 119 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 TMEM147Q9BVK8 224 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 C11orf68Q9H3H3 251 aaKnown RBP0.55□□□□□ -2.32
CDC40-204ENST00000431461 NMNAT1Q9HAN9 279 aaPredicted RBP0.55□□□□□ -2.32
CDC40-204ENST00000431461 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.55□□□□□ -2.32
CDC40-204ENST00000431461 SLC22A13Q9Y226 551 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 ANAPC1Q9H1A4 1944 aa0.55□□□□□ -2.32
CDC40-204ENST00000431461 ADGRB2O60241 1585 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 MYOFQ9NZM1 2061 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 HEATR5BQ9P2D3 2071 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 TRGV10A0A0A0MS01 117 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 TRAV12-1A0A0B4J245 112 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 hADV38S2A0JD32 116 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 C2orf70A6NJV1 201 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 PDE6DO43924 150 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 SERPINE1P05121 402 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 SPI1P17947 270 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 FKBP2P26885 142 aaKnown RBP0.54□□□□□ -2.32
CDC40-204ENST00000431461 CDC42P60953 191 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 CCL7P80098 99 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 SRSF6Q13247 344 aaKnown RBP0.54□□□□□ -2.32
CDC40-204ENST00000431461 TSNQ15631 228 aaKnown RBP0.54□□□□□ -2.32
CDC40-204ENST00000431461 KISS1Q15726 138 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 OR2T10Q8NGZ9 312 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 GNPDA2Q8TDQ7 276 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 ZNF431Q8TF32 576 aaPredicted RBP0.54□□□□□ -2.32
CDC40-204ENST00000431461 HIST1H2BLQ99880 126 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 PARVBQ9HBI1 364 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 MYO3BQ8WXR4 1341 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 STRCQ7RTU9 1775 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 MTUS2Q5JR59 1369 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 FMN1Q68DA7 1419 aa0.54□□□□□ -2.32
CDC40-204ENST00000431461 ARFGEF3Q5TH69 2177 aa0.53□□□□□ -2.32
CDC40-204ENST00000431461 BAZ2BQ9UIF8 2168 aaKnown RBP0.53□□□□□ -2.32
CDC40-204ENST00000431461 hCG_1818297A0A087WSY0 165 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms