RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ABHD5Q8WTS1 349 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
USHBP1-203ENST00000431146 PIMREGQ9BSJ6 248 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 FNDC10F2Z333 226 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 TMEM11P17152 192 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 MISP3Q96FF7 219 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 SEPSECSQ9HD40 501 aaKnown RBP13.31□□□□□ -0.28
USHBP1-203ENST00000431146 RPS10P5Q9NQ39 176 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 MRPL36Q9P0J6 103 aaKnown RBP13.31□□□□□ -0.28
USHBP1-203ENST00000431146 VAX2Q9UIW0 290 aa13.31□□□□□ -0.28
USHBP1-203ENST00000431146 IGHV3-21A0A0B4J1V1 117 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 TEX22C9J3V5 150 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 MOSP00540 346 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 LINC00869P0C866 280 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 RPL29P47914 159 aaKnown RBP13.3□□□□□ -0.28
USHBP1-203ENST00000431146 SUB1P53999 127 aaKnown RBP eCLIP13.3□□□□□ -0.28
USHBP1-203ENST00000431146 PRR20EP86478 221 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 PRR20CP86479 221 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 PRR20DP86480 221 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 PRR20BP86481 221 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 PRR20AP86496 221 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 HABP2Q14520 560 aaPredicted RBP13.3□□□□□ -0.28
USHBP1-203ENST00000431146 C9orf152Q5JTZ5 239 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 SAPCD1Q5SSQ6 148 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 C10orf105Q8TEF2 133 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 SRSF12Q8WXF0 261 aaKnown RBP13.3□□□□□ -0.28
USHBP1-203ENST00000431146 SLC45A2Q9UMX9 530 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 NBR2O15453 112 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 FOXH1O75593 365 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 IFNA1P01562 189 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 SLC35E1Q96K37 410 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 RNF5Q99942 180 aa13.3□□□□□ -0.28
USHBP1-203ENST00000431146 IGHV4-30-2A0A087WSY4 118 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 H3BQ15 152 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 CNIH1O95406 144 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 ARL14EPLP0DKL9 152 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 MAS1LP35410 378 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 CD81P60033 236 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 SLC35E3Q7Z769 313 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 NPIPB3Q92617 1050 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 FAM103A1Q9BTL3 118 aaKnown RBP13.29□□□□□ -0.28
USHBP1-203ENST00000431146 KCNIP2Q9NS61 270 aa13.29□□□□□ -0.28
USHBP1-203ENST00000431146 CHTOPQ9Y3Y2 248 aaKnown RBP13.29□□□□□ -0.28
USHBP1-203ENST00000431146 ANKRD17O75179 2603 aaKnown RBP13.29□□□□□ -0.28
USHBP1-203ENST00000431146 C7orf77A4D0Y5 90 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 PAGE4O60829 102 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 UBE2G2P60604 165 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 FAM90A2PQ658T7 463 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 CLEC2AQ6UVW9 174 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 RNASEH2CQ8TDP1 164 aaKnown RBP13.28□□□□□ -0.28
USHBP1-203ENST00000431146 CACNG8Q8WXS5 425 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 CRYBA1P05813 215 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 PSMB3P49720 205 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 SNRPEP62304 92 aaKnown RBP13.28□□□□□ -0.28
USHBP1-203ENST00000431146 MEF2BQ02080 365 aaPredicted RBP13.28□□□□□ -0.28
USHBP1-203ENST00000431146 CHD6Q8TD26 2715 aa13.28□□□□□ -0.28
USHBP1-203ENST00000431146 IGHV3OR16-10A0A075B7F0 116 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 NCBP2LA6PVI3 153 aaKnown RBP13.27□□□□□ -0.28
USHBP1-203ENST00000431146 SOX15O60248 233 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 SAA4P35542 130 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 UBE2E1P51965 193 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 MINOS1Q5TGZ0 78 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 CCDC144NLQ6NUI1 221 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 OR2T10Q8NGZ9 312 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 AJUBAQ96IF1 538 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 SLC25A33Q9BSK2 321 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 MINOS1-NBL1R4GNA1 71 aa13.27□□□□□ -0.28
USHBP1-203ENST00000431146 NDUFA3O95167 84 aa13.27□□□□□ -0.29
USHBP1-203ENST00000431146 COX6B1P14854 86 aa13.27□□□□□ -0.29
USHBP1-203ENST00000431146 RND2P52198 227 aa13.27□□□□□ -0.29
USHBP1-203ENST00000431146 ZNF90Q03938 601 aa13.27□□□□□ -0.29
USHBP1-203ENST00000431146 KIAA0141Q14154 515 aaPredicted RBP13.27□□□□□ -0.29
USHBP1-203ENST00000431146 FAM120AOSQ5T036 256 aa13.27□□□□□ -0.29
USHBP1-203ENST00000431146 FAM78BQ5VT40 261 aa13.27□□□□□ -0.29
USHBP1-203ENST00000431146 NPBQ8NG41 125 aa13.27□□□□□ -0.29
USHBP1-203ENST00000431146 VWC2LB2RUY7 222 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 STAG3L2P0CL84 134 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 COL8A1P27658 744 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 PMS2P11Q13670 270 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 SPNS3Q6ZMD2 512 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 MIR17HGQ75NE6 70 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 MRPL41Q8IXM3 137 aaKnown RBP13.26□□□□□ -0.29
USHBP1-203ENST00000431146 OR4F5Q8NH21 305 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 C2CD4CQ8TF44 421 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 OR4F4Q96R69 305 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
USHBP1-203ENST00000431146 RHOBP62745 196 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 C5orf64Q2M2E5 130 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 DNLZQ5SXM8 178 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 C16orf54Q6UWD8 224 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 ZNF114Q8NC26 417 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 F11RQ9Y624 299 aaKnown RBP13.25□□□□□ -0.29
USHBP1-203ENST00000431146 USP9YO00507 2555 aaPredicted RBP13.25□□□□□ -0.29
USHBP1-203ENST00000431146 IGKV1D-37A0A075B6S9 117 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 FXYD3Q14802 87 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 ZNF674Q2M3X9 581 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 CYP2G1PQ6ZSU1 146 aa13.25□□□□□ -0.29
USHBP1-203ENST00000431146 OR1P1Q8NH06 330 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms