RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 NDUFA6P56556 154 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 CD69Q07108 199 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 TRBV24-1A0A075B6N3 115 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 A0A1W2PPI3 338 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 IGLV1-47P01700 117 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 USF1P22415 310 aaPredicted RBP11.23□□□□□ -0.61
RBM39-212ENST00000429968 PPOXP50336 477 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 TMEM37Q8WXS4 190 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 FKBP11Q9NYL4 201 aa11.23□□□□□ -0.61
RBM39-212ENST00000429968 VPS13CQ709C8 3753 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 ABCA1O95477 2261 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 A0A1W2PPR1 153 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 FNDC10F2Z333 226 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 ENSAO43768 121 aaKnown RBP11.22□□□□□ -0.61
RBM39-212ENST00000429968 COX7A1P24310 79 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 GALR1P47211 349 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 UCNP55089 124 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 RHOBP62745 196 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 LY6DQ14210 128 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 ACY3Q96HD9 319 aa11.22□□□□□ -0.61
RBM39-212ENST00000429968 PDE6DO43924 150 aa11.21□□□□□ -0.61
RBM39-212ENST00000429968 SOD3P08294 240 aa11.21□□□□□ -0.61
RBM39-212ENST00000429968 MFAP2P55001 183 aa11.21□□□□□ -0.61
RBM39-212ENST00000429968 PRSS8Q16651 343 aa11.21□□□□□ -0.61
RBM39-212ENST00000429968 PYGO2Q9BRQ0 406 aa11.21□□□□□ -0.61
RBM39-212ENST00000429968 GSX1Q9H4S2 264 aaPredicted RBP11.21□□□□□ -0.61
RBM39-212ENST00000429968 PSMB11A5LHX3 300 aa11.21□□□□□ -0.62
RBM39-212ENST00000429968 H7BYZ3 331 aa11.21□□□□□ -0.62
RBM39-212ENST00000429968 HOXA5P20719 270 aa11.21□□□□□ -0.62
RBM39-212ENST00000429968 HLA-DRB5Q30154 266 aa11.21□□□□□ -0.62
RBM39-212ENST00000429968 CYB5R2Q6BCY4 276 aa11.21□□□□□ -0.62
RBM39-212ENST00000429968 PCGF1Q9BSM1 259 aa11.21□□□□□ -0.62
RBM39-212ENST00000429968 COL12A1Q99715 3063 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 TRBV23-1A0A0A0MS06 115 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 DLL1O00548 723 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 SCGB1D1O95968 90 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 ZNF90Q03938 601 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 FBLN7Q53RD9 439 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 FUT9Q9Y231 359 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 PPIAL4CA0A0B4J2A2 164 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 A0A1W2PPQ1 181 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 OR10J4P0C629 311 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 PPIAL4GP0DN37 164 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 AREGP15514 252 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
RBM39-212ENST00000429968 RAB31Q13636 194 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 PSG5Q15238 335 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 PDZD11Q5EBL8 140 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 OR4X1Q8NH49 305 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 MIOXQ9UGB7 285 aa11.2□□□□□ -0.62
RBM39-212ENST00000429968 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 IGHV1-3A0A0C4DH29 117 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 A0A1B0GV90 55 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 IGLC7A0M8Q6 106 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 INS-IGF2F8WCM5 200 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 BUB1B-PAK6H3BSN5 160 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 K7EN84 100 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 VENTXO95231 258 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 CRYGBP07316 175 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
RBM39-212ENST00000429968 LBHQ53QV2 105 aaPredicted RBP11.19□□□□□ -0.62
RBM39-212ENST00000429968 ETFRF1Q6IPR1 90 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 HCP5Q6MZN7 132 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 LHFPL4Q7Z7J7 247 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 OCC1Q8TAD7 63 aa11.19□□□□□ -0.62
RBM39-212ENST00000429968 F6UZH7 168 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 TGFAP01135 160 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 OR5G3P0C626 314 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 C11orf71Q6IPW1 123 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 AKAP6Q13023 2319 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 IGHV3-21A0A0B4J1V1 117 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 TMEM238C9JI98 176 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 GPX4P36969 197 aaPredicted RBP11.18□□□□□ -0.62
RBM39-212ENST00000429968 PNKDQ8N490 385 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 VSTM2AQ8TAG5 236 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 FAM167A-AS1Q96KT0 104 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 UHRF2Q96PU4 802 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 CLEC7AQ9BXN2 247 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 WNK2Q9Y3S1 2297 aa11.18□□□□□ -0.62
RBM39-212ENST00000429968 GGTLC3B5MD39 225 aa11.17□□□□□ -0.62
RBM39-212ENST00000429968 SNRPCP09234 159 aaKnown RBP11.17□□□□□ -0.62
RBM39-212ENST00000429968 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
RBM39-212ENST00000429968 VMA21Q3ZAQ7 101 aa11.17□□□□□ -0.62
RBM39-212ENST00000429968 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
RBM39-212ENST00000429968 ZNF48Q96MX3 618 aaPredicted RBP11.17□□□□□ -0.62
RBM39-212ENST00000429968 SLC25A2Q9BXI2 301 aa11.17□□□□□ -0.62
RBM39-212ENST00000429968 ONECUT1Q9UBC0 465 aa11.17□□□□□ -0.62
RBM39-212ENST00000429968 FCN1O00602 326 aa11.17□□□□□ -0.62
RBM39-212ENST00000429968 TCAPO15273 167 aa11.17□□□□□ -0.62
RBM39-212ENST00000429968 OR7C2O60412 319 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms