RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 A0A1W2PS18 150 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 CD24P25063 80 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 A0A0G2JLM5 398 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 CFDP00746 253 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-207ENST00000429896 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
PTCH1-207ENST00000429896 TMEM177Q53S58 311 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 Q5BKY6 102 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 GLMPQ8WWB7 406 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 J3QLI3 93 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 CTXND1A0A1B0GTU2 59 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 NPVFQ9HCQ7 196 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 LRP4O75096 1905 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 TNFRSF9Q07011 255 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 RSPO1Q2MKA7 263 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-207ENST00000429896 ASCL4Q6XD76 172 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 MED12Q93074 2177 aa10.64□□□□□ -0.71
PTCH1-207ENST00000429896 IGHV2-70DA0A0C4DH43 119 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 RELQ04864 619 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-207ENST00000429896 RNF144BQ7Z419 303 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 CEP250Q9BV73 2442 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 TGIF2-C20orf24A0A0A6YYL0 155 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 CD99P14209 185 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 TEX36Q5VZQ5 186 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.63□□□□□ -0.71
PTCH1-207ENST00000429896 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 COQ2Q96H96 371 aa10.63□□□□□ -0.71
PTCH1-207ENST00000429896 PRTN3P24158 256 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 ESPL1Q14674 2120 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 DNAJC13O75165 2243 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 PNRC1Q12796 327 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-207ENST00000429896 COL5A1-AS1Q5SY13 56 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 WDR86Q86TI4 376 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 SAA1P0DJI8 122 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-207ENST00000429896 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
PTCH1-207ENST00000429896 CR1LQ2VPA4 569 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 ATG2AQ2TAZ0 1938 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 FER1L5A0AVI2 2057 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 CD8AP01732 235 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 IGHV3-11P01762 117 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 CRYBB3P26998 211 aa10.62□□□□□ -0.71
PTCH1-207ENST00000429896 H3BUX3 64 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 SNAI2O43623 268 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 GOLT1AQ6ZVE7 132 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 IGHV1-3A0A0C4DH29 117 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 BUB1B-PAK6H3BSN5 160 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 TRGC2P03986 189 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 FBXL7Q9UJT9 491 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 IGKV1D-13A0A0B4J2D9 117 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 NDUFS7O75251 213 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 IGKV1-13P0DP09 117 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 NSUN5P1Q3KNT7 163 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 LHFPL5Q8TAF8 219 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 JKAMPQ9P055 326 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 PARLQ9H300 379 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 GRIFINA4D1Z8 144 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 RNASE4P34096 147 aaKnown RBP10.61□□□□□ -0.71
PTCH1-207ENST00000429896 ATP5IP56385 69 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-207ENST00000429896 MYO7BQ6PIF6 2116 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 TEX45Q8NA69 505 aa10.61□□□□□ -0.71
PTCH1-207ENST00000429896 ZNF430Q9H8G1 570 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-207ENST00000429896 TRBV6-6A0A0A6YYG2 114 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 M0R381 172 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 CD69Q07108 199 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 NRGNQ92686 78 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 C11orf68Q9H3H3 251 aaKnown RBP10.6□□□□□ -0.71
PTCH1-207ENST00000429896 TMEM160Q9NX00 188 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 C19orf84I3L1E1 186 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 UBE2E1P51965 193 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 SLC25A48Q6ZT89 311 aaKnown RBP10.6□□□□□ -0.71
PTCH1-207ENST00000429896 LHFPL4Q7Z7J7 247 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 MRPL18Q9H0U6 180 aaKnown RBP10.6□□□□□ -0.71
PTCH1-207ENST00000429896 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
PTCH1-207ENST00000429896 ELOA3CA0A087WX78 387 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-207ENST00000429896 NAPSAO96009 420 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 GUSBP1Q15486 140 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 A0A1B0GV72 72 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 RRHO14718 337 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 IL4P05112 153 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 SEC11BP0C7V7 166 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 QRFPP83859 136 aa10.6□□□□□ -0.71
PTCH1-207ENST00000429896 Q71RC1 249 aaPredicted RBP10.6□□□□□ -0.71
PTCH1-207ENST00000429896 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 NAT1P18440 290 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 SAA4P35542 130 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 SELENOTP62341 195 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 RUSC1-AS1Q66K80 236 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 BIVMQ86UB2 503 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 TCRBV4S1A1TA0A5B7 111 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 RTBDNQ9BSG5 229 aaPredicted RBP10.59□□□□□ -0.71
PTCH1-207ENST00000429896 MAP1LC3AQ9H492 121 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 MSGN1A6NI15 193 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 UPK2O00526 184 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 PLA2G2AP14555 144 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 UCP1P25874 307 aa10.59□□□□□ -0.71
PTCH1-207ENST00000429896 DUTP33316 252 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms