RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 POLR3KQ9Y2Y1 108 aaPredicted RBP10.42□□□□□ -0.74
CPNE4-201ENST00000429747 IGKV1D-17A0A075B6S4 117 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 CORTO00230 105 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 ATP5IP56385 69 aaPredicted RBP10.42□□□□□ -0.74
CPNE4-201ENST00000429747 PRCDQ00LT1 54 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 CD69Q07108 199 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 TMEM70Q9BUB7 260 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 SCRT1Q9BWW7 348 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 SNHG12Q9BXW3 62 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 HILPDAQ9Y5L2 63 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 PCNX2A6NKB5 2137 aa10.42□□□□□ -0.74
CPNE4-201ENST00000429747 ORM1P02763 201 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 PRSS1P07477 247 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 CD3EP07766 207 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 PCP4P48539 62 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 LEMD1Q68G75 181 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 SLC25A34Q6PIV7 304 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 YLPM1P49750 1951 aaKnown RBP10.41□□□□□ -0.74
CPNE4-201ENST00000429747 LAMA2P24043 3122 aaKnown RBP10.41□□□□□ -0.74
CPNE4-201ENST00000429747 A0A1W2PRE2 83 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 OR2J3O76001 311 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 FAM90A1Q86YD7 464 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 CACNG8Q8WXS5 425 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 SCNM1Q9BWG6 230 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 MED13Q9UHV7 2174 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 FAM90A9PA6NNJ1 464 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 UQCRFS1P47985 274 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 LCN12Q6JVE5 192 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 ASCL5Q7RTU5 278 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 TMEM186Q96B77 213 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 PPP1R14DQ9NXH3 145 aa10.41□□□□□ -0.74
CPNE4-201ENST00000429747 MUC15Q8N387 334 aa10.4□□□□□ -0.74
CPNE4-201ENST00000429747 CD40P25942 277 aa10.4□□□□□ -0.74
CPNE4-201ENST00000429747 PPOXP50336 477 aa10.4□□□□□ -0.74
CPNE4-201ENST00000429747 LOXL4Q96JB6 756 aa10.4□□□□□ -0.74
CPNE4-201ENST00000429747 OR4C46A6NHA9 309 aa10.4□□□□□ -0.74
CPNE4-201ENST00000429747 PRSS8Q16651 343 aa10.4□□□□□ -0.74
CPNE4-201ENST00000429747 LINC00479Q96M42 142 aa10.4□□□□□ -0.74
CPNE4-201ENST00000429747 MKI67P46013 3256 aaKnown RBP10.4□□□□□ -0.75
CPNE4-201ENST00000429747 C9JCJ5 164 aa10.4□□□□□ -0.75
CPNE4-201ENST00000429747 CD59P13987 128 aa10.4□□□□□ -0.75
CPNE4-201ENST00000429747 FCGR2BP31994 310 aaPredicted RBP10.4□□□□□ -0.75
CPNE4-201ENST00000429747 THYN1Q9P016 225 aa10.4□□□□□ -0.75
CPNE4-201ENST00000429747 EML5Q05BV3 1969 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 SNAI2O43623 268 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 CDKN1AP38936 164 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 Q6ZR03 302 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 PMCHL2Q9BQD1 86 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 C11orf1Q9H5F2 150 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 CDC42EP3Q9UKI2 254 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 FOXA2Q9Y261 457 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-201ENST00000429747 S4R3C0 116 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 TYMSP04818 313 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 AREGP15514 252 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 SRSF6Q13247 344 aaKnown RBP10.39□□□□□ -0.75
CPNE4-201ENST00000429747 SNRNP40Q96DI7 357 aaKnown RBP10.39□□□□□ -0.75
CPNE4-201ENST00000429747 TM4SF5O14894 197 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 LMO1P25800 156 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 CEACAM3P40198 252 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 CLEC5AQ9NY25 188 aa10.39□□□□□ -0.75
CPNE4-201ENST00000429747 NUDT3O95989 172 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 IGKV1-16P04430 117 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 NMUP48645 174 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 COTL1Q14019 142 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 KRTAP27-1Q3LI81 207 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 TMEM131Q92545 1883 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 GPR82Q96P67 336 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 DIRC2Q96SL1 478 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 LINC00312Q9Y6C7 94 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 LGALS7P47929 136 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 MUC21Q5SSG8 566 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 FBXL15Q9H469 300 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 RPUSD1Q9UJJ7 312 aaKnown RBP10.38□□□□□ -0.75
CPNE4-201ENST00000429747 IGHV3-35A0A0C4DH35 117 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 TMEM30BQ3MIR4 351 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 C12orf54Q6X4T0 127 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 TMUB1Q9BVT8 246 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 UFC1Q9Y3C8 167 aa10.38□□□□□ -0.75
CPNE4-201ENST00000429747 HLA-DRB1P01911 266 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 ODF3L1Q8IXM7 274 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 SLC25A33Q9BSK2 321 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 RPP21Q9H633 154 aaKnown RBP10.37□□□□□ -0.75
CPNE4-201ENST00000429747 DLEU1O43261 78 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 GPX1P07203 203 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 C3orf79P0CE67 100 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 S100A4P26447 101 aaKnown RBP10.37□□□□□ -0.75
CPNE4-201ENST00000429747 CX3CL1P78423 397 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 NUDT10Q8NFP7 164 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 NUDT11Q96G61 164 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 AP5S1Q9NUS5 200 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 MED12LQ86YW9 2145 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 ADAMTS9Q9P2N4 1935 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 TMEM189A5PLL7 270 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 IGKV3-15P01624 115 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 IGHV1-46P01743 117 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 TDGF1P3P51864 188 aa10.37□□□□□ -0.75
CPNE4-201ENST00000429747 FOXC1Q12948 553 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms