RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MRPL18Q9H0U6 180 aaKnown RBP7.1□□□□□ -1.27
GABPB1-205ENST00000429662 GAL3ST2Q9H3Q3 398 aa7.1□□□□□ -1.27
GABPB1-205ENST00000429662 SLC35D1Q9NTN3 355 aa7.1□□□□□ -1.27
GABPB1-205ENST00000429662 RPUSD1Q9UJJ7 312 aaKnown RBP7.1□□□□□ -1.27
GABPB1-205ENST00000429662 TRBV20OR9-2A0A075B6H5 130 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 M0R143 59 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 ISLRO14498 428 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 SPRY3O43610 288 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 C8orf88P0DMB2 117 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 IGFBP2P18065 325 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 TNFRSF1AP19438 455 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 SUB1P53999 127 aaKnown RBP eCLIP7.09□□□□□ -1.27
GABPB1-205ENST00000429662 PSG5Q15238 335 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 USF2Q15853 346 aaPredicted RBP7.09□□□□□ -1.27
GABPB1-205ENST00000429662 OR10J3Q5JRS4 329 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 C1orf185Q5T7R7 199 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 ZNF788Q6ZQV5 615 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 MMD2Q8IY49 270 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 C8orf31Q8N9H6 132 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 NUP37Q8NFH4 326 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 OR1L4Q8NGR5 311 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 VSTM2AQ8TAG5 236 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 TMEM190Q8WZ59 177 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 GAFA1Q96PS6 74 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 MDFIQ99750 246 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 COMMD5Q9GZQ3 224 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 SEPSECSQ9HD40 501 aaKnown RBP7.09□□□□□ -1.27
GABPB1-205ENST00000429662 TMEM106BQ9NUM4 274 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 LINC00312Q9Y6C7 94 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 ZANQ9Y493 2812 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 CNTRLQ7Z7A1 2325 aa7.09□□□□□ -1.27
GABPB1-205ENST00000429662 TEX50A0A1B0GTY4 177 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 A0A1B0GV90 55 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF705FA8MVS1 300 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 FCN1O00602 326 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CRYABP02511 175 aaKnown RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 REG1AP05451 166 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 DEFA4P12838 97 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 USF1P22415 310 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 PPOXP50336 477 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CX3CL1P78423 397 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CD69Q07108 199 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF833PQ6ZTB9 187 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 SEM1Q6ZVN7 128 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 MIR17HGQ75NE6 70 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 LRP11Q86VZ4 500 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 BAGE3Q86Y29 109 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 BAGE2Q86Y30 109 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 OR5AU1Q8NGC0 362 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF714Q96N38 554 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 C20orf144Q9BQM9 153 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 GCM1Q9NP62 436 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 V9GYV3 84 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF407Q9C0G0 2248 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ANK2Q01484 3957 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 VSTM5A8MXK1 200 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 K7EN84 100 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 FOXH1O75593 365 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 IGHV1-46P01743 117 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CT45A6P0DMU7 189 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CT45A5P0DMU8 189 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CT45A7P0DMV0 189 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 RNASE2P10153 161 aaKnown RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CD33P20138 364 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 BRS3P32247 399 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 NUTF2P61970 127 aaKnown RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 HOXA4Q00056 320 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 TNP2Q05952 138 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 TMEM183BQ1AE95 376 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 MSMPQ1L6U9 139 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 KRTCAP3Q53RY4 240 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 TMEM177Q53S58 311 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 OXLD1Q5BKU9 147 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CENPWQ5EE01 88 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 SPATA31B1PQ5VZV4 182 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 ZNF474Q6S9Z5 364 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 TEX43Q6ZNM6 134 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 TMEM256Q8N2U0 113 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 STXBP6Q8NFX7 210 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 SMIM12Q96EX1 92 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 MISP3Q96FF7 219 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 PLPPR2Q96GM1 343 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 TBX15Q96SF7 602 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 HINT2Q9BX68 163 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 KRTAP9-2Q9BYQ4 174 aa7.08□□□□□ -1.28
GABPB1-205ENST00000429662 AURKAIP1Q9NWT8 199 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-205ENST00000429662 CHD3Q12873 2000 aaKnown RBP7.07□□□□□ -1.28
GABPB1-205ENST00000429662 DNAJC13O75165 2243 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 SMIM27A0A1W2PRY6 76 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 SNURFLB1AK76 121 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 OR7C2O60412 319 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 MMP23AO75900 390 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 AMY1AP04745 511 aa7.07□□□□□ -1.28
GABPB1-205ENST00000429662 OR4A8P0C604 315 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms