RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 C1QL4Q86Z23 238 aa11.46□□□□□ -0.57
GARNL3-204ENST00000429629 PINX1Q96BK5 328 aaKnown RBP11.46□□□□□ -0.57
GARNL3-204ENST00000429629 MAGT1Q9H0U3 335 aa11.46□□□□□ -0.57
GARNL3-204ENST00000429629 FNDC4Q9H6D8 234 aaPredicted RBP11.46□□□□□ -0.57
GARNL3-204ENST00000429629 ZMAT5Q9UDW3 170 aaKnown RBP11.46□□□□□ -0.57
GARNL3-204ENST00000429629 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.57
GARNL3-204ENST00000429629 C15orf62A8K5M9 175 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 NUPL2O15504 423 aaKnown RBP11.45□□□□□ -0.58
GARNL3-204ENST00000429629 CLN5O75503 358 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 SCGB2A1O75556 95 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 SCAF4O95104 1147 aaKnown RBP11.45□□□□□ -0.58
GARNL3-204ENST00000429629 TMEM50AO95807 157 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 IFNA4P05014 189 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 GPR183P32249 361 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 SLURP1P55000 103 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
GARNL3-204ENST00000429629 RELQ04864 619 aaPredicted RBP11.45□□□□□ -0.58
GARNL3-204ENST00000429629 CD69Q07108 199 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 ACSM6Q6P461 480 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 ASB13Q8WXK3 278 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 ELOVL1Q9BW60 279 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 ZNF436Q9C0F3 470 aaPredicted RBP11.45□□□□□ -0.58
GARNL3-204ENST00000429629 PSENENQ9NZ42 101 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 ALG5Q9Y673 324 aa11.45□□□□□ -0.58
GARNL3-204ENST00000429629 K7EPK0 472 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 OR2C1O95371 312 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 IGHV3-23P01764 117 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 IAPPP10997 89 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 PVALBP20472 110 aaPredicted RBP11.44□□□□□ -0.58
GARNL3-204ENST00000429629 ADMP35318 185 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 Q56UQ5 140 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 SPANXN5Q5MJ07 72 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 C9orf66Q5T8R8 295 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 SAMD5Q5TGI4 173 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 PRSS54Q6PEW0 395 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 TMEM14EPQ6UXP3 125 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 OR9G4Q8NGQ1 327 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 C11orf1Q9H5F2 150 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 PEMTQ9UBM1 199 aa11.44□□□□□ -0.58
GARNL3-204ENST00000429629 RCL1Q9Y2P8 373 aaKnown RBP11.44□□□□□ -0.58
GARNL3-204ENST00000429629 OR2T8A6NH00 312 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 PPP5D1E7EU14 171 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 FNDC10F2Z333 226 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 K7EMT4 169 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 NDUFA4O00483 81 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 GOSR2O14653 212 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 SSSCA1O60232 199 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 GNG7O60262 68 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 RLN2P04090 185 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 H2BFSP57053 126 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 SYNJ2BPP57105 145 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 MLANAQ16655 118 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 KPRPQ5T749 579 aaPredicted RBP11.43□□□□□ -0.58
GARNL3-204ENST00000429629 S4R3C0 116 aa11.43□□□□□ -0.58
GARNL3-204ENST00000429629 IGHV3-21A0A0B4J1V1 117 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 A8MWP6 167 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 PRSS46E5RG02 174 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 L7N2F9 121 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 SCGB1D2O95969 90 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 VAMP2P63027 116 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 RAB32Q13637 225 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 IL34Q6ZMJ4 242 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 MARC2Q969Z3 335 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 OR4C12Q96R67 309 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 GGACTQ9BVM4 153 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 MED28Q9H204 178 aa11.42□□□□□ -0.58
GARNL3-204ENST00000429629 PMS2P5A8MQ11 134 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 SEC14L6B5MCN3 397 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 DEDDO75618 318 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 IGLL1P15814 213 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 YPEL3P61236 119 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-204ENST00000429629 EGFEM1PQ0D2K5 195 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 GAMTQ14353 236 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 C11orf87Q6NUJ2 197 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 SLC16A13Q7RTY0 426 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 UBAC2Q8NBM4 344 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 OR1S2Q8NGQ3 325 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 MGAT4CQ9UBM8 478 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
GARNL3-204ENST00000429629 SIX6O95475 246 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 IGLC1P0CG04 106 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 C8orf88P0DMB2 117 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 OXLD1Q5BKU9 147 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 ZNF600Q6ZNG1 722 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 OR10P1Q8NGE3 313 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 TMEM190Q8WZ59 177 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 NPIPB3Q92617 1050 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 SLC35E1Q96K37 410 aa11.4□□□□□ -0.58
GARNL3-204ENST00000429629 LYRM2Q9NU23 88 aaPredicted RBP11.4□□□□□ -0.58
GARNL3-204ENST00000429629 MRPL36Q9P0J6 103 aaKnown RBP11.4□□□□□ -0.58
GARNL3-204ENST00000429629 E5RGE8 158 aa11.39□□□□□ -0.59
GARNL3-204ENST00000429629 IGHV3-48P01763 117 aa11.39□□□□□ -0.59
GARNL3-204ENST00000429629 CSN3P07498 182 aa11.39□□□□□ -0.59
GARNL3-204ENST00000429629 PET100P0DJ07 73 aa11.39□□□□□ -0.59
GARNL3-204ENST00000429629 RND2P52198 227 aa11.39□□□□□ -0.59
GARNL3-204ENST00000429629 RRAS2P62070 204 aaPredicted RBP11.39□□□□□ -0.59
GARNL3-204ENST00000429629 PPP1R1CQ8WVI7 109 aa11.39□□□□□ -0.59
GARNL3-204ENST00000429629 ZNF414Q96IQ9 312 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms