RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 A0A1B0GU03 582 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 GNG7O60262 68 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 RELQ04864 619 aaPredicted RBP13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 SPANXN2Q5MJ10 180 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 TOMM20LQ6UXN7 152 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 OR52B4Q8NGK2 314 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 ZMAT4Q9H898 229 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 SHPKQ9UHJ6 478 aa13.5□□□□□ -0.25
SSR4P1-202ENST00000429427 IGHV7-4-1A0A0J9YVY3 117 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 CHEK1O14757 476 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 TSPAN4O14817 238 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 TMEM50AO95807 157 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 SULT1A3P0DMM9 295 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 SULT1A4P0DMN0 295 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 RBPMS2Q6ZRY4 209 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 DUSP18Q8NEJ0 188 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 DEDD2Q8WXF8 326 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 RNF2Q99496 336 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 HIPK2Q9H2X6 1198 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 ENY2Q9NPA8 101 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 HEYLQ9NQ87 328 aaPredicted RBP13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 HSPB7Q9UBY9 170 aa13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 DYNC2H1Q8NCM8 4307 aaKnown RBP13.49□□□□□ -0.25
SSR4P1-202ENST00000429427 IGHV3OR16-13A0A075B7E8 117 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 IGHV3-74A0A0B4J1X5 117 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 CORTO00230 105 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 YIF1AO95070 293 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 OPRK1P41145 380 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 HTR2BP41595 481 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 NPBWR1P48145 328 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 CCR6P51684 374 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 SUB1P53999 127 aaKnown RBP eCLIP13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 ODF3L2Q3SX64 289 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 C2orf83Q53S99 150 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 TMEM128Q5BJH2 165 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 LGI3Q8N145 548 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 LILRB2Q8N423 598 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 OR4X1Q8NH49 305 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 SPAG8Q99932 426 aaPredicted RBP13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 SPATA25Q9BR10 227 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 RHPN1-AS1Q9BWJ2 59 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 PUS1Q9Y606 427 aaKnown RBP eCLIP13.48□□□□□ -0.25
SSR4P1-202ENST00000429427 STARD9Q9P2P6 4700 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 CLN5O75503 358 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 BTCP35070 178 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 PPP1R1AQ13522 171 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 SMCO1Q147U7 214 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 TMEM116Q8NCL8 245 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 SLC24A4Q8NFF2 622 aa13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 SLC25A21Q9BQT8 299 aaPredicted RBP13.47□□□□□ -0.25
SSR4P1-202ENST00000429427 PITX3O75364 302 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 ANXA3P12429 323 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 FAM90A2PQ658T7 463 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 PRSS54Q6PEW0 395 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 LRTM2Q8N967 370 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 FAM110AQ9BQ89 295 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 RBKSQ9H477 322 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 UBQLN2Q9UHD9 624 aa13.46□□□□□ -0.25
SSR4P1-202ENST00000429427 TRAV14DV4A0A0A6YYC5 116 aa13.45□□□□□ -0.26
SSR4P1-202ENST00000429427 SFT2D2O95562 160 aa13.45□□□□□ -0.26
SSR4P1-202ENST00000429427 VAMP1P23763 118 aa13.45□□□□□ -0.26
SSR4P1-202ENST00000429427 SRPXP78539 464 aa13.45□□□□□ -0.26
SSR4P1-202ENST00000429427 TIGITQ495A1 244 aa13.45□□□□□ -0.26
SSR4P1-202ENST00000429427 ST8SIA2Q92186 375 aa13.45□□□□□ -0.26
SSR4P1-202ENST00000429427 IGLC1P0CG04 106 aa13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 NPY1RP25929 384 aa13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 RBMS2Q15434 407 aaKnown RBP13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 MUC7Q8TAX7 377 aa13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 RNASEH2CQ8TDP1 164 aaKnown RBP13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 DTD1Q8TEA8 209 aa13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 VSIRQ9H7M9 311 aa13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 FLVCR2Q9UPI3 526 aa13.44□□□□□ -0.26
SSR4P1-202ENST00000429427 IGHV3-66A0A0C4DH42 116 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 LINC00854A0A1B0GVQ3 168 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 NDUFB6O95139 128 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 IL7P13232 177 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 RND2P52198 227 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 TRIQKQ629K1 86 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 LAMTOR1Q6IAA8 161 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 CENPSQ8N2Z9 138 aa13.43□□□□□ -0.26
SSR4P1-202ENST00000429427 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
SSR4P1-202ENST00000429427 ZNF124Q15973 351 aa13.42□□□□□ -0.26
SSR4P1-202ENST00000429427 GGTLC1Q9BX51 225 aa13.42□□□□□ -0.26
SSR4P1-202ENST00000429427 NDUFA13Q9P0J0 144 aa13.42□□□□□ -0.26
SSR4P1-202ENST00000429427 IGKV3-7A0A075B6H7 116 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 RPS10-NUDT3A0A1W2PQS6 291 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 OR4C46A6NHA9 309 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 C3orf84H3BNL1 204 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 CASC10Q5T4H9 136 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 OR1S1Q8NH92 325 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 GINS3Q9BRX5 216 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 CACFD1Q9UGQ2 172 aa13.41□□□□□ -0.26
SSR4P1-202ENST00000429427 TENM2Q9NT68 2774 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms