RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 PLSCR4Q9NRQ2 329 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 SRRM5B3KS81 715 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 F8VVB4 439 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 F8VWA3 439 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 GTSCR1Q86UQ5 136 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 DMRTA2Q96SC8 542 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 SMPXQ9UHP9 88 aa10.64□□□□□ -0.71
LDB3-205ENST00000429277 SPSB3Q6PJ21 355 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 MBD3L1Q8WWY6 194 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 CHCHD1Q96BP2 118 aaKnown RBP10.63□□□□□ -0.71
LDB3-205ENST00000429277 IGKV1D-13A0A0B4J2D9 117 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 IGKV1-9A0A0C4DH69 117 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 IGKV1-13P0DP09 117 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 FAM169BQ8N8A8 192 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 LYZL4Q96KX0 146 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 LINC00587B1AMM8 73 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 DPM2O94777 84 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 LYPD3O95274 346 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 PLNP26678 52 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 EFNA4P52798 201 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 GNB1LQ9BYB4 327 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 PGPEP1Q9NXJ5 209 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 IGHV1-46P01743 117 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 NIT1Q86X76 327 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 NRXN2Q9P2S2 1712 aa10.63□□□□□ -0.71
LDB3-205ENST00000429277 A0A1B0GV72 72 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 CRPP02741 224 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 HEPN1Q6WQI6 88 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 RNF126Q9BV68 326 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 DEPPQ9NTK1 212 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 TDRD6O60522 2096 aaKnown RBP10.62□□□□□ -0.71
LDB3-205ENST00000429277 TIMM23O14925 209 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 GATA2P23769 480 aaPredicted RBP10.62□□□□□ -0.71
LDB3-205ENST00000429277 SPACA3Q8IXA5 215 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 SPCS1Q9Y6A9 102 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 TRAV41A0A0B4J266 112 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 TBX6O95947 436 aaPredicted RBP10.62□□□□□ -0.71
LDB3-205ENST00000429277 TMEM86BQ8N661 226 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 TSKUQ8WUA8 353 aa10.62□□□□□ -0.71
LDB3-205ENST00000429277 COL4A1P02462 1669 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 HTN3P15516 51 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 NR2C2APQ86WQ0 139 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 NRN1Q9NPD7 142 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 TMEM242Q9NWH2 141 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 SPRR3Q9UBC9 169 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 EFNB3Q15768 340 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 SIGLEC15Q6ZMC9 328 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 PGPEP1LA6NFU8 196 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 J3QRE1 110 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 NDUFA3O95167 84 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 LINC00614P0C842 121 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 MORN3Q6PF18 240 aaPredicted RBP10.61□□□□□ -0.71
LDB3-205ENST00000429277 C14orf144Q96I85 54 aa10.61□□□□□ -0.71
LDB3-205ENST00000429277 APOMO95445 188 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 RASL11AQ6T310 242 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 ZNF362Q5T0B9 420 aaPredicted RBP10.6□□□□□ -0.71
LDB3-205ENST00000429277 SEPSECSQ9HD40 501 aaKnown RBP10.6□□□□□ -0.71
LDB3-205ENST00000429277 A0A1W2PRX2 142 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 M0R1W7 72 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 FGF16O43320 207 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 ZNF688P0C7X2 276 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 ZNF672Q499Z4 452 aaPredicted RBP10.6□□□□□ -0.71
LDB3-205ENST00000429277 SLC25A48Q6ZT89 311 aaKnown RBP10.6□□□□□ -0.71
LDB3-205ENST00000429277 COQ2Q96H96 371 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 CASP8AP2Q9UKL3 1982 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 CD59P13987 128 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 MUC21Q5SSG8 566 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 PRADC1Q9BSG0 188 aa10.6□□□□□ -0.71
LDB3-205ENST00000429277 ZNF815PA8K554 130 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 SERF1AO75920 110 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 MTCL1Q9Y4B5 1905 aaKnown RBP10.59□□□□□ -0.71
LDB3-205ENST00000429277 A0A1B0GV90 55 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 VGLL1Q99990 258 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 MBNL3Q9NUK0 354 aaKnown RBP10.59□□□□□ -0.71
LDB3-205ENST00000429277 SLC25A15Q9Y619 301 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 PTPRFP10586 1907 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 TRAV9-2A0A087WT02 112 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 IGHV2-26A0A0B4J1V2 119 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 C17orf82Q86X59 251 aaPredicted RBP10.59□□□□□ -0.71
LDB3-205ENST00000429277 OR2K2Q8NGT1 345 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 RNASE7Q9H1E1 156 aaKnown RBP10.59□□□□□ -0.71
LDB3-205ENST00000429277 TRAV1-1A0A0B4J248 108 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 B4DSR2 109 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 CD28P10747 220 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 GNG5P63218 68 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 RAMP3O60896 148 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 SEC11AP67812 179 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 C21orf62-AS1Q17RA5 79 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 TRGV9Q99603 122 aa10.59□□□□□ -0.71
LDB3-205ENST00000429277 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 BTCP35070 178 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 LY6G6FQ5SQ64 297 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 TEX38Q6PEX7 206 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 PAQR4Q8N4S7 273 aaPredicted RBP10.58□□□□□ -0.72
LDB3-205ENST00000429277 HEATR5BQ9P2D3 2071 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 IGHV3OR16-8A0A075B7F1 116 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 TRBV6-6A0A0A6YYG2 114 aa10.58□□□□□ -0.72
LDB3-205ENST00000429277 A0A1B0GWJ7 208 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms