RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 SIX6O95475 246 aa17.07■□□□□ 0.32
PTPN18-205ENST00000428843 LY86O95711 162 aa17.07■□□□□ 0.32
PTPN18-205ENST00000428843 IFNA4P05014 189 aa17.07■□□□□ 0.32
PTPN18-205ENST00000428843 RPP30P78346 268 aaKnown RBP17.07■□□□□ 0.32
PTPN18-205ENST00000428843 SPSB3Q6PJ21 355 aa17.07■□□□□ 0.32
PTPN18-205ENST00000428843 OR4C12Q96R67 309 aa17.07■□□□□ 0.32
PTPN18-205ENST00000428843 CHRDL1Q9BU40 450 aa17.07■□□□□ 0.32
PTPN18-205ENST00000428843 GAR1Q9NY12 217 aaKnown RBP17.07■□□□□ 0.32
PTPN18-205ENST00000428843 MRPL36Q9P0J6 103 aaKnown RBP17.07■□□□□ 0.32
PTPN18-205ENST00000428843 PAIP2BQ9ULR5 123 aaKnown RBP17.07■□□□□ 0.32
PTPN18-205ENST00000428843 RCL1Q9Y2P8 373 aaKnown RBP17.07■□□□□ 0.32
PTPN18-205ENST00000428843 MGAM2Q2M2H8 2515 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 H3BP45 60 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 TMEM50AO95807 157 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 IL15RAQ13261 267 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 OXA1LQ15070 435 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 SPANXN5Q5MJ07 72 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 GPHB5Q86YW7 130 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 SMIM8Q96KF7 97 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 PSENENQ9NZ42 101 aa17.06■□□□□ 0.32
PTPN18-205ENST00000428843 IGHV3-35A0A0C4DH35 117 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 GNG7O60262 68 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 CTSGP08311 255 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 ADMP35318 185 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 NPBWR1P48145 328 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 PAX9P55771 341 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 RAB11AP62491 216 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 C9orf66Q5T8R8 295 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 OR9G4Q8NGQ1 327 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 RAB40CQ96S21 281 aa17.05■□□□□ 0.32
PTPN18-205ENST00000428843 LSM5Q9Y4Y9 91 aaKnown RBP17.05■□□□□ 0.32
PTPN18-205ENST00000428843 NOTCH3Q9UM47 2321 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 K7EPK0 472 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 NUPL2O15504 423 aaKnown RBP17.04■□□□□ 0.32
PTPN18-205ENST00000428843 SLC25A4P12235 298 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 CD69Q07108 199 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 FAM106AQ4KMX7 169 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 ETFRF1Q6IPR1 90 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 OR4X1Q8NH49 305 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 GPR61Q9BZJ8 451 aa17.04■□□□□ 0.32
PTPN18-205ENST00000428843 ZNF436Q9C0F3 470 aaPredicted RBP17.04■□□□□ 0.32
PTPN18-205ENST00000428843 STRAPQ9Y3F4 350 aaKnown RBP17.04■□□□□ 0.32
PTPN18-205ENST00000428843 LGALS9O00182 355 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 CLN5O75503 358 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 TAS2R30P59541 319 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 RAB32Q13637 225 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 PRSS54Q6PEW0 395 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 SLC16A13Q7RTY0 426 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 REC114Q7Z4M0 266 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 ELOVL1Q9BW60 279 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 MGAT4CQ9UBM8 478 aa17.03■□□□□ 0.32
PTPN18-205ENST00000428843 SAP30O75446 220 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 RND2P52198 227 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 H2BFSP57053 126 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 S100A10P60903 97 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 IL34Q6ZMJ4 242 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 ZNF414Q96IQ9 312 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 NMES1Q9C002 83 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 PEMTQ9UBM1 199 aa17.02■□□□□ 0.32
PTPN18-205ENST00000428843 ZNF320A2RRD8 509 aa17.01■□□□□ 0.31
PTPN18-205ENST00000428843 GPX4P36969 197 aaPredicted RBP17.01■□□□□ 0.31
PTPN18-205ENST00000428843 BEAN1Q3B7T3 259 aa17.01■□□□□ 0.31
PTPN18-205ENST00000428843 UNQ9165/PRO28630Q6UXU0 137 aa17.01■□□□□ 0.31
PTPN18-205ENST00000428843 TMEM116Q8NCL8 245 aa17.01■□□□□ 0.31
PTPN18-205ENST00000428843 PRSS46E5RG02 174 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 L7N2F9 121 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 NDUFA4O00483 81 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 WIPF1O43516 503 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 TSC22D2O75157 780 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 CSN3P07498 182 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 INSL3P51460 131 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 VAMP2P63027 116 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 RELQ04864 619 aaPredicted RBP17■□□□□ 0.31
PTPN18-205ENST00000428843 NPIPB3Q92617 1050 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 WDR89Q96FK6 387 aaPredicted RBP17■□□□□ 0.31
PTPN18-205ENST00000428843 ACY3Q96HD9 319 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 C11orf1Q9H5F2 150 aa17■□□□□ 0.31
PTPN18-205ENST00000428843 CYCSP99999 105 aaKnown RBP16.99■□□□□ 0.31
PTPN18-205ENST00000428843 KPRPQ5T749 579 aaPredicted RBP16.99■□□□□ 0.31
PTPN18-205ENST00000428843 TMEM14EPQ6UXP3 125 aa16.99■□□□□ 0.31
PTPN18-205ENST00000428843 CACNG8Q8WXS5 425 aa16.99■□□□□ 0.31
PTPN18-205ENST00000428843 SLC35E1Q96K37 410 aa16.99■□□□□ 0.31
PTPN18-205ENST00000428843 TRAV30A0A087WSZ9 112 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 C2orf70A6NJV1 201 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 PMS2P5A8MQ11 134 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 A8MWP6 167 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 CCNKO75909 580 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 METTL15P1P0C7V9 234 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 EDN2P20800 178 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 GAMTQ14353 236 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 TMEM190Q8WZ59 177 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 MED28Q9H204 178 aa16.98■□□□□ 0.31
PTPN18-205ENST00000428843 IGHV3OR16-8A0A075B7F1 116 aa16.97■□□□□ 0.31
PTPN18-205ENST00000428843 SCGB2A1O75556 95 aa16.97■□□□□ 0.31
PTPN18-205ENST00000428843 IGKV1-17P01599 117 aa16.97■□□□□ 0.31
PTPN18-205ENST00000428843 IGLC1P0CG04 106 aa16.97■□□□□ 0.31
PTPN18-205ENST00000428843 PVALBP20472 110 aaPredicted RBP16.97■□□□□ 0.31
PTPN18-205ENST00000428843 OR10J1P30954 320 aa16.97■□□□□ 0.31
PTPN18-205ENST00000428843 TIGITQ495A1 244 aa16.97■□□□□ 0.31
PTPN18-205ENST00000428843 LRRC37A5PQ49AS3 106 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms